RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 IGHG1P01857 330 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 UBBP0CG47 229 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 DUX4L2P0CJ85 424 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 DUX4L3P0CJ86 424 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 DUX4L4P0CJ87 422 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 DUX4L5P0CJ88 424 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 DUX4L6P0CJ89 424 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 DUX4L7P0CJ90 424 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 RPS27AP62979 156 aaKnown RBP12.74□□□□□ -0.37
HIF3A-202ENST00000244303 UBA52P62987 128 aaKnown RBP12.74□□□□□ -0.37
HIF3A-202ENST00000244303 IL13RA1P78552 427 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 DCDP81605 110 aaKnown RBP12.74□□□□□ -0.37
HIF3A-202ENST00000244303 HLA-BQ31612 363 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 PMS2CLQ68D20 193 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 RHOUQ7L0Q8 258 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 ABHD12BQ7Z5M8 362 aaPredicted RBP12.74□□□□□ -0.37
HIF3A-202ENST00000244303 CPEB2Q7Z5Q1 589 aaKnown RBP12.74□□□□□ -0.37
HIF3A-202ENST00000244303 ZDHHC22Q8N966 263 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 OR10R2Q8NGX6 335 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 PPP1R1CQ8WVI7 109 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 OR5B2Q96R09 309 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 DUX4Q9UBX2 424 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 PILRBQ9UKJ0 227 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 RARRES3Q9UL19 164 aa12.74□□□□□ -0.37
HIF3A-202ENST00000244303 PCP4L1A6NKN8 68 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 TRAF3IP2O43734 574 aaPredicted RBP12.73□□□□□ -0.37
HIF3A-202ENST00000244303 IL2RAP01589 272 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 AVPR2P30518 371 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 ATP1B3P54709 279 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 DEFA5Q01523 94 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 BEX5Q5H9J7 111 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 FAM74A1Q5RGS3 127 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 JMJD6Q6NYC1 403 aaPredicted RBP12.73□□□□□ -0.37
HIF3A-202ENST00000244303 KCNRGQ8N5I3 272 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 ADAD2Q8NCV1 583 aaKnown RBP12.73□□□□□ -0.37
HIF3A-202ENST00000244303 OR8B12Q8NGG6 310 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 ASH2LQ9UBL3 628 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 A0A0A6YYD4 124 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 CCDC163A0A0D9SF12 145 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 KANTRA0A1W2PQU2 76 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 FAM25EA8MYX2 175 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 RAMP1O60894 148 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 SCGNO76038 276 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 WDPCPO95876 746 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 PMP2P02689 132 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 SLC25A4P12235 298 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 HOXA6P31267 233 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 CASRP41180 1078 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 PI4KAP42356 2102 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 ZNF121P58317 390 aaPredicted RBP12.73□□□□□ -0.37
HIF3A-202ENST00000244303 ZNF345Q14585 488 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 ATXN7L3Q14CW9 347 aaPredicted RBP12.73□□□□□ -0.37
HIF3A-202ENST00000244303 LCN10Q6JVE6 187 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 GLIPR1L1Q6UWM5 242 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 PXT1Q8NFP0 134 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 OR2I1PQ8NGU4 316 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 CASTOR1Q8WTX7 329 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 MITD1Q8WV92 249 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 CCDC74BQ96LY2 380 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 VRK1Q99986 396 aaPredicted RBP12.73□□□□□ -0.37
HIF3A-202ENST00000244303 ZNF416Q9BWM5 594 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 LPAR5Q9H1C0 372 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 SLC25A32Q9H2D1 315 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 SLC6A15Q9H2J7 730 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 MOB1AQ9H8S9 216 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 FN3KRPQ9HA64 309 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 ZNF319Q9P2F9 582 aa12.73□□□□□ -0.37
HIF3A-202ENST00000244303 NCOA6Q14686 2063 aaPredicted RBP12.72□□□□□ -0.37
HIF3A-202ENST00000244303 IGLV3-32A0A0A0MS00 114 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 RNF222A6NCQ9 220 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 RER1O15258 196 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 ZFAND5O76080 213 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 ERCC1P07992 297 aaPredicted RBP12.72□□□□□ -0.37
HIF3A-202ENST00000244303 AKR1C4P17516 323 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 KLK2P20151 261 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 VAMP1P23763 118 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 SFTPDP35247 375 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 GABREP78334 506 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 OR5AS1Q8N127 324 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 DTWD2Q8NBA8 298 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 ADPRHL1Q8NDY3 354 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 TMEM104Q8NE00 496 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 OR2M3Q8NG83 312 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 MRPS24Q96EL2 167 aaKnown RBP12.72□□□□□ -0.37
HIF3A-202ENST00000244303 SPSB2Q99619 263 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 PHB2Q99623 299 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 IER2Q9BTL4 223 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 CRB3Q9BUF7 120 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 GPR84Q9NQS5 396 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 PCDHB16Q9NRJ7 776 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 FBLN5Q9UBX5 448 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 MRPS28Q9Y2Q9 187 aaKnown RBP12.72□□□□□ -0.37
HIF3A-202ENST00000244303 OR2F2O95006 317 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 IFNA6P05013 189 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 HLA-GP17693 338 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 DLSTP36957 453 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 OR3A4PP47883 348 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 GSK3AP49840 483 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 LUMP51884 338 aaPredicted RBP12.72□□□□□ -0.37
HIF3A-202ENST00000244303 OR2F1Q13607 317 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms