RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 MS4A6EQ96DS6 147 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 LMF1Q96S06 567 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 CYP8B1Q9UNU6 501 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 TMEM202A6NGA9 273 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 LYPD3O95274 346 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 SFT2D2O95562 160 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 CHRM2P08172 466 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 OR10J1P30954 320 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 GDI1P31150 447 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 PMPCAQ10713 525 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 PMS2P11Q13670 270 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 HS6ST3Q8IZP7 471 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 OR1L6Q8NGR2 347 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 OR14L1PQ8NHC6 308 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 ORAOV1Q8WV07 137 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 NIPSNAP3BQ9BS92 247 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 ALKBH7Q9BT30 221 aaPredicted RBP11.63□□□□□ -0.55
MSH2-201ENST00000233146 SH3BGRL2Q9UJC5 107 aa11.63□□□□□ -0.55
MSH2-201ENST00000233146 A8MVM7 634 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 ETV2O00321 342 aaPredicted RBP11.62□□□□□ -0.55
MSH2-201ENST00000233146 CYB5R3P00387 301 aaPredicted RBP11.62□□□□□ -0.55
MSH2-201ENST00000233146 IGHEP01854 428 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 PRH1P02810 166 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 FBXO45P0C2W1 286 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 MDKP21741 143 aaPredicted RBP11.62□□□□□ -0.55
MSH2-201ENST00000233146 APOBEC1P41238 236 aaKnown RBP11.62□□□□□ -0.55
MSH2-201ENST00000233146 CLEC18BQ6UXF7 455 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 TMEM64Q6YI46 380 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 HOGA1Q86XE5 327 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 OR10AC1Q8NH08 325 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 MARCH1Q8TCQ1 289 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 NAGKQ9UJ70 344 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 ZNF860A6NHJ4 632 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 NPIPB15A6NHN6 443 aaPredicted RBP11.62□□□□□ -0.55
MSH2-201ENST00000233146 CBY3A6NI87 242 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 IL33O95760 270 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 IRF1P10914 325 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 PTGER1P34995 402 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 SHHQ15465 462 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 FAM189A2Q15884 450 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 BATFQ16520 125 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 ALG10BQ5I7T1 473 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 C1orf185Q5T7R7 199 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 KMT5CQ86Y97 462 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 OR4K13Q8NH42 304 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 TMEM230Q96A57 120 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 ACY3Q96HD9 319 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 OR7D2Q96RA2 312 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 COMMD4Q9H0A8 199 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 CSTL1Q9H114 145 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 A0A1B0GV50 99 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 CLDN34H7C241 214 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 B3GAT3O94766 335 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 HIST1H1CP16403 213 aaKnown RBP11.62□□□□□ -0.55
MSH2-201ENST00000233146 RND3P61587 244 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 ANKRD55Q3KP44 614 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 OGFOD3Q6PK18 319 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 AQP3Q92482 292 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 SPACA7Q96KW9 195 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 TPSD1Q9BZJ3 242 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 NMNAT2Q9BZQ4 307 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 SRD5A3Q9H8P0 318 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 PRR13Q9NZ81 148 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 GSKIPQ9P0R6 139 aa11.62□□□□□ -0.55
MSH2-201ENST00000233146 THSD7AQ9UPZ6 1657 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 DNAJC25-GNG10A0A024R161 153 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 LOC105371242A0A075B767 164 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 A0A0A6YYH2 397 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 FITM1A5D6W6 292 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 A6NJ64 397 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 MTX2O75431 263 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 CCL20P78556 96 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 TSTA3Q13630 321 aaPredicted RBP11.61□□□□□ -0.55
MSH2-201ENST00000233146 SLC9A3R2Q15599 337 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 CACUL1Q86Y37 369 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 OR51A4Q8NGJ6 313 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 ERGIC1Q969X5 290 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 TNFRSF13CQ96RJ3 184 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 METTL8Q9H825 291 aaKnown RBP11.61□□□□□ -0.55
MSH2-201ENST00000233146 GTF2A1LQ9UNN4 478 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 ZNF443Q9Y2A4 671 aaPredicted RBP11.61□□□□□ -0.55
MSH2-201ENST00000233146 TRIP12Q14669 1992 aaPredicted RBP11.61□□□□□ -0.55
MSH2-201ENST00000233146 NDUFS8O00217 210 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 NDUFB8O95169 186 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 TACSTD2P09758 323 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 HOXC8P31273 242 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 HRH1P35367 487 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 PSG6Q00889 435 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 P2RY6Q15077 328 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 COX18Q8N8Q8 333 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 UBE2E3Q969T4 207 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 SLC35E1Q96K37 410 aa11.61□□□□□ -0.55
MSH2-201ENST00000233146 SMIM35A0A1B0GVV1 85 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 TMPRSS11DO60235 418 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 CD46P15529 392 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 GRPRP30550 384 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 SLC6A6P31641 620 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 OR3A2P47893 321 aa11.6□□□□□ -0.55
MSH2-201ENST00000233146 NCBP2P52298 156 aaKnown RBP eCLIP11.6□□□□□ -0.553e-9■■□□□ 13.2
MSH2-201ENST00000233146 FHL1Q13642 323 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms