RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 FOXF1Q12946 379 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 RAB32Q13637 225 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 MESTQ5EB52 335 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 TMEM92Q6UXU6 159 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 WDSUB1Q8N9V3 476 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 OR9K2Q8NGE7 335 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 PHOSPHO2Q8TCD6 241 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 PGLYRP3Q96LB9 341 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 TMEM74BQ9NUR3 256 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 OR14J1Q9UGF5 321 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 GDF2Q9UK05 429 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-201ENST00000226574 NGFRP08138 427 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 NQO2P16083 231 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 ABCD3P28288 659 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 PLPP5Q8NEB5 264 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 GPR137Q96N19 417 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 LAT2Q9GZY6 243 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 PADI1Q9ULC6 663 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 DOCK7Q96N67 2140 aa12.34□□□□□ -0.43
NFKB1-201ENST00000226574 A0A087WV48 116 aa12.33□□□□□ -0.43
NFKB1-201ENST00000226574 ADAM10O14672 748 aa12.33□□□□□ -0.43
NFKB1-201ENST00000226574 MSTNO14793 375 aa12.33□□□□□ -0.43
NFKB1-201ENST00000226574 OR2J2O76002 312 aa12.33□□□□□ -0.43
NFKB1-201ENST00000226574 RECKO95980 971 aa12.33□□□□□ -0.43
NFKB1-201ENST00000226574 CHATP28329 748 aa12.33□□□□□ -0.43
NFKB1-201ENST00000226574 ACAA2P42765 397 aaKnown RBP12.33□□□□□ -0.43
NFKB1-201ENST00000226574 ATPAF1Q5TC12 328 aaPredicted RBP12.33□□□□□ -0.43
NFKB1-201ENST00000226574 PRSS35Q8N3Z0 413 aa12.33□□□□□ -0.43
NFKB1-201ENST00000226574 BVESQ8NE79 360 aa12.33□□□□□ -0.43
NFKB1-201ENST00000226574 OR2G3Q8NGZ4 309 aa12.33□□□□□ -0.43
NFKB1-201ENST00000226574 ZCCHC4Q9H5U6 513 aa12.33□□□□□ -0.43
NFKB1-201ENST00000226574 UNKLQ9H9P5 680 aaKnown RBP12.33□□□□□ -0.43
NFKB1-201ENST00000226574 ZNF286AQ9HBT8 521 aa12.33□□□□□ -0.43
NFKB1-201ENST00000226574 CHD5Q8TDI0 1954 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 SHANK1Q9Y566 2161 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 SPRY1O43609 319 aaPredicted RBP12.33□□□□□ -0.44
NFKB1-201ENST00000226574 EIF4E2O60573 245 aaKnown RBP12.33□□□□□ -0.44
NFKB1-201ENST00000226574 OR5H8P0DN80 308 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 NME1P15531 152 aaKnown RBP12.33□□□□□ -0.44
NFKB1-201ENST00000226574 GABRG2P18507 467 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 CASRP41180 1078 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 MFGE8Q08431 387 aaPredicted RBP12.33□□□□□ -0.44
NFKB1-201ENST00000226574 TMEM255AQ5JRV8 349 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 AAED1Q7RTV5 226 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 YRDCQ86U90 279 aaKnown RBP12.33□□□□□ -0.44
NFKB1-201ENST00000226574 VASH2Q86V25 355 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 EXD3Q8N9H8 876 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 SPIN2AQ99865 258 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 SPIN2BQ9BPZ2 258 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 FOXQ1Q9C009 403 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 SRPK3Q9UPE1 567 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 TMEM184BQ9Y519 407 aaPredicted RBP12.33□□□□□ -0.44
NFKB1-201ENST00000226574 CD300LBA8K4G0 201 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 UMAD1C9J7I0 102 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 CYR61O00622 381 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 SIGLEC6O43699 453 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 CST7O76096 145 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 ZIC2O95409 532 aaPredicted RBP12.33□□□□□ -0.44
NFKB1-201ENST00000226574 SYNGR4O95473 234 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 TBX6O95947 436 aaPredicted RBP12.33□□□□□ -0.44
NFKB1-201ENST00000226574 RFC3P40938 356 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 EMC4Q5J8M3 183 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 SLC16A13Q7RTY0 426 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 SLC43A2Q8N370 569 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 OR5M9Q8NGP3 310 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 MRPL38Q96DV4 380 aaKnown RBP12.33□□□□□ -0.44
NFKB1-201ENST00000226574 C10orf90Q96M02 699 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 FLVCR1Q9Y5Y0 555 aa12.33□□□□□ -0.44
NFKB1-201ENST00000226574 NYNRINQ9P2P1 1898 aaKnown RBP12.33□□□□□ -0.44
NFKB1-201ENST00000226574 TRAV20A0A0B4J274 112 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 HLA-DOBP13765 273 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 ENPP1P22413 925 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 RPS15P62841 145 aaKnown RBP12.32□□□□□ -0.44
NFKB1-201ENST00000226574 IL10RAQ13651 578 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 MKXQ8IYA7 352 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 SHISA5Q8N114 240 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 SPICQ8N5J4 248 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 ZFP62Q8NB50 900 aaPredicted RBP12.32□□□□□ -0.44
NFKB1-201ENST00000226574 SLC25A38Q96DW6 304 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 S1PR5Q9H228 398 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 ABI3Q9P2A4 366 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 ZNF724A8MTY0 619 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 BPNT1O95861 308 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 GDF1P27539 372 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 CAPZBP47756 277 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 CPNE4Q96A23 557 aaPredicted RBP12.32□□□□□ -0.44
NFKB1-201ENST00000226574 FBXO17Q96EF6 278 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 NELFAQ9H3P2 528 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 SCN10AQ9Y5Y9 1956 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 A0A1B0GX78 115 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 FAM74A7A6NL05 159 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 PATE4P0C8F1 98 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 RAB4BP61018 213 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 RAB11AP62491 216 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 FAM74A3Q4VXF1 159 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 LCN15Q6UWW0 184 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 TMPPEQ6ZT21 453 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 LIN37Q96GY3 246 aaPredicted RBP12.32□□□□□ -0.44
NFKB1-201ENST00000226574 VSTM2LQ96N03 204 aa12.32□□□□□ -0.44
NFKB1-201ENST00000226574 ZFP57Q9NU63 452 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms