RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CLPTM1O96005 669 aa23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 UBCP0CG48 685 aaKnown RBP23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 TUBG1P23258 451 aa23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 PSMB9P28065 219 aa23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 DMKNQ6E0U4 476 aaPredicted RBP23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 FBXW12Q6X9E4 464 aa23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 OR5AK2Q8NH90 309 aa23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 SYNPRQ8TBG9 265 aa23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 SPSB4Q96A44 273 aa23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 OPALINQ96PE5 141 aa23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 DHRS9Q9BPW9 319 aa23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 MRPL37Q9BZE1 423 aaKnown RBP23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 COMMD4Q9H0A8 199 aa23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 TUBG2Q9NRH3 451 aa23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 DCHS2Q6V1P9 2916 aa23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 LOC107986453A0A1B0GWG9 222 aa23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 HS3ST1O14792 307 aa23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 TMEM255AQ5JRV8 349 aa23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 MBNL2Q5VZF2 373 aaKnown RBP23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 MRPL24Q96A35 216 aaKnown RBP23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 C14orf79Q96F83 325 aa23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 REPIN1Q9BWE0 567 aaKnown RBP23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 VCX3AQ9NNX9 186 aa23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 TMEM212A6NML5 194 aa23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 ZNF250P15622 560 aa23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 APOBEC3AP31941 199 aaPredicted RBP23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 KLF3P57682 345 aaPredicted RBP23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 MLLT11Q13015 90 aaPredicted RBP23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 PSG7Q13046 419 aa23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 LIPKQ5VXJ0 399 aa23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 OR2T2Q6IF00 324 aa23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 RPS4Y2Q8TD47 263 aa23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 MYEF2Q9P2K5 600 aaKnown RBP23.37■■□□□ 1.33
CHMP4B-201ENST00000217402 A0A1B0GTI1 187 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 hCG_38984A0A1B0GV85 526 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 A0A1B0GVI7 797 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 VSTM5A8MXK1 200 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 IGLV3-1P01715 115 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 RAC2P15153 192 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 CFL1P23528 166 aaKnown RBP23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 SERPINF1P36955 418 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 FAM3AP98173 230 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 TSTQ16762 297 aaKnown RBP23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 ARMCX4Q5H9R4 360 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 BHLHE23Q8NDY6 225 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 OR10AC1Q8NH08 325 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 GHSRQ92847 366 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 UFD1Q92890 307 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 PLK3Q9H4B4 646 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 OPA3Q9H6K4 179 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 ISYNA1Q9NPH2 558 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 ZNF391Q9UJN7 358 aa23.36■■□□□ 1.33
CHMP4B-201ENST00000217402 CRYBG3Q68DQ2 2970 aa23.35■■□□□ 1.33
CHMP4B-201ENST00000217402 GGT3PA6NGU5 568 aa23.35■■□□□ 1.33
CHMP4B-201ENST00000217402 TRIM64CA6NLI5 447 aa23.35■■□□□ 1.33
CHMP4B-201ENST00000217402 H3BSA7 217 aa23.35■■□□□ 1.33
CHMP4B-201ENST00000217402 SYT7O43581 403 aa23.35■■□□□ 1.33
CHMP4B-201ENST00000217402 GSK3AP49840 483 aa23.35■■□□□ 1.33
CHMP4B-201ENST00000217402 ALKBH6Q3KRA9 238 aa23.35■■□□□ 1.33
CHMP4B-201ENST00000217402 TMEM244Q5VVB8 128 aa23.35■■□□□ 1.33
CHMP4B-201ENST00000217402 OR5AS1Q8N127 324 aa23.35■■□□□ 1.33
CHMP4B-201ENST00000217402 HAVCR1Q96D42 359 aa23.35■■□□□ 1.33
CHMP4B-201ENST00000217402 PGLYRP3Q96LB9 341 aa23.35■■□□□ 1.33
CHMP4B-201ENST00000217402 A0A1W2PPW3 197 aa23.34■■□□□ 1.33
CHMP4B-201ENST00000217402 PLPP2O43688 288 aa23.34■■□□□ 1.33
CHMP4B-201ENST00000217402 TIMM8AO60220 97 aaPredicted RBP23.34■■□□□ 1.33
CHMP4B-201ENST00000217402 SELENOVP59797 346 aa23.34■■□□□ 1.33
CHMP4B-201ENST00000217402 FBXL14Q8N1E6 418 aa23.34■■□□□ 1.33
CHMP4B-201ENST00000217402 MUC15Q8N387 334 aa23.34■■□□□ 1.33
CHMP4B-201ENST00000217402 OR56B2PQ8NGI1 322 aa23.34■■□□□ 1.33
CHMP4B-201ENST00000217402 OR51A4Q8NGJ6 313 aa23.34■■□□□ 1.33
CHMP4B-201ENST00000217402 RGP1Q92546 391 aaPredicted RBP23.34■■□□□ 1.33
CHMP4B-201ENST00000217402 MRPS26Q9BYN8 205 aaKnown RBP23.34■■□□□ 1.33
CHMP4B-201ENST00000217402 PURGQ9UJV8 347 aaKnown RBP23.34■■□□□ 1.33
CHMP4B-201ENST00000217402 ISG15P05161 165 aa23.33■■□□□ 1.33
CHMP4B-201ENST00000217402 ACHEP22303 614 aa23.33■■□□□ 1.33
CHMP4B-201ENST00000217402 TTKP33981 857 aa23.33■■□□□ 1.33
CHMP4B-201ENST00000217402 DOK3Q7L591 496 aa23.33■■□□□ 1.33
CHMP4B-201ENST00000217402 OR13C5Q8NGS8 318 aa23.33■■□□□ 1.33
CHMP4B-201ENST00000217402 MUL1Q969V5 352 aa23.33■■□□□ 1.33
CHMP4B-201ENST00000217402 IGLV3-9A0A075B6K5 115 aa23.33■■□□□ 1.32
CHMP4B-201ENST00000217402 DHRS3O75911 302 aa23.33■■□□□ 1.32
CHMP4B-201ENST00000217402 CCL1P22362 96 aa23.33■■□□□ 1.32
CHMP4B-201ENST00000217402 ACKR3P25106 362 aa23.33■■□□□ 1.32
CHMP4B-201ENST00000217402 SSTR2P30874 369 aa23.33■■□□□ 1.32
CHMP4B-201ENST00000217402 TPBGQ13641 420 aa23.33■■□□□ 1.32
CHMP4B-201ENST00000217402 PLEKHF2Q9H8W4 249 aa23.33■■□□□ 1.32
CHMP4B-201ENST00000217402 HHLA2Q9UM44 414 aa23.33■■□□□ 1.32
CHMP4B-201ENST00000217402 ZNF281Q9Y2X9 895 aa23.33■■□□□ 1.32
CHMP4B-201ENST00000217402 CD300LBA8K4G0 201 aa23.32■■□□□ 1.32
CHMP4B-201ENST00000217402 IGHV3-13P01766 116 aa23.32■■□□□ 1.32
CHMP4B-201ENST00000217402 CPEP16870 476 aa23.32■■□□□ 1.32
CHMP4B-201ENST00000217402 GP2P55259 537 aaKnown RBP23.32■■□□□ 1.32
CHMP4B-201ENST00000217402 TNK1Q13470 666 aa23.32■■□□□ 1.32
CHMP4B-201ENST00000217402 OR8B8Q15620 311 aa23.32■■□□□ 1.32
CHMP4B-201ENST00000217402 TMED9Q9BVK6 235 aa23.32■■□□□ 1.32
CHMP4B-201ENST00000217402 FAIMQ9NVQ4 179 aa23.32■■□□□ 1.32
CHMP4B-201ENST00000217402 TAAR3PQ9P1P4 343 aa23.32■■□□□ 1.32
CHMP4B-201ENST00000217402 LMX1BO60663 402 aa23.31■■□□□ 1.32
CHMP4B-201ENST00000217402 LILRA1O75019 489 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms