RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 TMEM69Q5SWH9 247 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 HACD4Q5VWC8 232 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 CPEB3Q8NE35 698 aaKnown RBP13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 OR4D6Q8NGJ1 314 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 OR5M9Q8NGP3 310 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 ZFP3Q96NJ6 502 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 UQCC2Q9BRT2 126 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 MRPS7Q9Y2R9 242 aaKnown RBP13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 SPTBN4Q9H254 2564 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 DHRS7CA6NNS2 312 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 K7ENP7 123 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 LDLRAD4O15165 306 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 TPPPO94811 219 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 HLA-HP01893 362 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 ARSBP15848 533 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 PTH2RP49190 550 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 ANKRD16Q6P6B7 361 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 INO80CQ6PI98 192 aaPredicted RBP13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 TFAP2EQ6VUC0 442 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 FAM214BQ7L5A3 538 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 GCNT2Q8N0V5 402 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 OR1K1Q8NGR3 316 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 SGK3Q96BR1 496 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 C10orf35Q96D05 121 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 CHST5Q9GZS9 411 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 CNTD2Q9H8S5 307 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 NOX3Q9HBY0 568 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 ZNF391Q9UJN7 358 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 PFDN1O60925 122 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 MTRF1O75570 445 aaKnown RBP13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 CTAG2O75638 210 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 COX5BP10606 129 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 MAP2K3P46734 347 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 INPP1P49441 399 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 CAPZA1P52907 286 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 BIVMQ86UB2 503 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 CDH26Q8IXH8 852 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 C9orf106Q8NAJ2 232 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 OR2AE1Q8NHA4 323 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 SSC4DQ8WTU2 575 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 PP6455Q8WZ26 134 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 WNT2BQ93097 391 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 ZC3HAV1LQ96H79 300 aaKnown RBP13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 REEP6Q96HR9 211 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 NEDD4LQ96PU5 975 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 AUNIPQ9H7T9 357 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 RNF121Q9H920 327 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 B3GNT2Q9NY97 397 aa13.59□□□□□ -0.23
LAPTM4A-201ENST00000175091 IGKV1-9A0A0C4DH69 117 aa13.58□□□□□ -0.23
LAPTM4A-201ENST00000175091 LYRM1O43325 122 aa13.58□□□□□ -0.23
LAPTM4A-201ENST00000175091 LCATP04180 440 aa13.58□□□□□ -0.23
LAPTM4A-201ENST00000175091 GABRA1P14867 456 aa13.58□□□□□ -0.23
LAPTM4A-201ENST00000175091 TAS2R20P59543 309 aa13.58□□□□□ -0.23
LAPTM4A-201ENST00000175091 ZNF57Q68EA5 555 aaPredicted RBP13.58□□□□□ -0.23
LAPTM4A-201ENST00000175091 UTS2BQ765I0 119 aa13.58□□□□□ -0.23
LAPTM4A-201ENST00000175091 PTX4Q96A99 478 aa13.58□□□□□ -0.23
LAPTM4A-201ENST00000175091 ABHD17AQ96GS6 310 aa13.58□□□□□ -0.23
LAPTM4A-201ENST00000175091 GPR137Q96N19 417 aa13.58□□□□□ -0.23
LAPTM4A-201ENST00000175091 C1QTNF5Q9BXJ0 243 aa13.58□□□□□ -0.23
LAPTM4A-201ENST00000175091 RGCCQ9H4X1 137 aa13.58□□□□□ -0.23
LAPTM4A-201ENST00000175091 RBFOX1Q9NWB1 397 aaKnown RBP13.58□□□□□ -0.23
LAPTM4A-201ENST00000175091 PTPRQQ9UMZ3 2332 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 CIB4A0PJX0 185 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 GGT3PA6NGU5 568 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 AHRRA9YTQ3 701 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 DLL1O00548 723 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 XRCC3O43542 346 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 ALX3O95076 343 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 CRYABP02511 175 aaKnown RBP13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 ALDOBP05062 364 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 CD3GP09693 182 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 FAM157BP0CG42 384 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 FAHP16930 419 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 ZNF93P35789 620 aaPredicted RBP13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 ARR3P36575 388 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 MRPS10P82664 201 aaKnown RBP13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 GTF3C1Q12789 2109 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 PLEKHN1Q494U1 663 aaPredicted RBP13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 COLCA1Q6ZS62 124 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 DPPA2Q7Z7J5 298 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 CELF2-AS1Q8N7Q2 184 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 C15orf40Q8WUR7 153 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 GCDHQ92947 438 aaPredicted RBP13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 PIGLQ9Y2B2 252 aa13.58□□□□□ -0.24
LAPTM4A-201ENST00000175091 SVILO95425 2214 aa13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 LOC100509620A0A075B734 347 aa13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 GABARAPH6UMI1 98 aa13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 BPNT1O95861 308 aa13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 EDN3P14138 238 aa13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 ACKR3P25106 362 aa13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 HOXD11P31277 338 aaPredicted RBP13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 HIKESHIQ53FT3 197 aa13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 RNASE12Q5GAN4 147 aaKnown RBP13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 NSUN5P2Q63ZY6 315 aa13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 OR2A2Q6IF42 318 aa13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 CADM3Q8N126 398 aa13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 OR6K3Q8NGY3 331 aa13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 BCL2L2Q92843 193 aaPredicted RBP13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 TP53TG5Q9Y2B4 290 aa13.57□□□□□ -0.24
LAPTM4A-201ENST00000175091 hCG_38984A0A1B0GV85 526 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms