RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 TMEM104Q8NE00 496 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 ESAMQ96AP7 390 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 C12orf57Q99622 126 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 MAP1LC3CQ9BXW4 147 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 CSAG2Q9Y5P2 127 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 FEZF1A0PJY2 475 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 RFPL4AA6NLU0 287 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 RFPL4AL1F8VTS6 287 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 ARPC3O15145 178 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF865P0CJ78 1059 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 MS4A2Q01362 244 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 TBPL2Q6SJ96 375 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 C2orf50Q96LR7 162 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 MS4A8Q9BY19 250 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 LIN28AQ9H9Z2 209 aaKnown RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 ANXA10Q9UJ72 324 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF541Q9H0D2 1346 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 ABLIM3O94929 683 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 COX6CP09669 75 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 CEBPBP17676 345 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 SLC5A2P31639 672 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 CRTC1Q6UUV9 634 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 GAL3ST2Q9H3Q3 398 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 DOK2O60496 412 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 TBXA2RP21731 343 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 CXCL12P48061 93 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 SNRPD2P62316 118 aaKnown RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 PAX5Q02548 391 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 HLA-BQ31612 363 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 DHRS11Q6UWP2 260 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 CLEC14AQ86T13 490 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 FAM219AQ8IW50 185 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 PELI3Q8N2H9 469 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 OR52R1Q8NGF1 315 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 ARRDC3Q96B67 414 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 ADAT1Q9BUB4 502 aaKnown RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 ANGPTL4Q9BY76 406 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 DUSP21Q9H596 190 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 GAB2Q9UQC2 676 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 ADAMTSL1Q8N6G6 1762 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 CCDC187A0A096LP49 1063 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 CLDN34H7C241 214 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 MPDU1O75352 247 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 SCRG1O75711 98 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 HMGA2P52926 109 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 PNLIPRP2P54317 469 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 WDR74Q6RFH5 385 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 MED25Q71SY5 747 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 PRR18Q8N4B5 295 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 TAAR2Q9P1P5 351 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 RBPJLQ9UBG7 517 aa5.54□□□□□ -1.52
VPS13D-201ENST00000011700 PTRH2Q9Y3E5 179 aaKnown RBP5.54□□□□□ -1.52
VPS13D-201ENST00000011700 TMED7-TICAM2A0A0A6YYA0 188 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 OR5B21A6NL26 309 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 OR7C2O60412 319 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 ZIC2O95409 532 aaPredicted RBP5.53□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF26P17031 533 aaPredicted RBP5.53□□□□□ -1.52
VPS13D-201ENST00000011700 ARNTP27540 789 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 SLC25A1P53007 311 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 SRYQ05066 204 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 IL13RA2Q14627 380 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF787Q6DD87 383 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 TMEM229BQ8NBD8 167 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 OR4F15Q8NGB8 312 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 C1RLQ9NZP8 487 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 MIOXQ9UGB7 285 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 EXOGQ9Y2C4 368 aaKnown RBP5.53□□□□□ -1.52
VPS13D-201ENST00000011700 TMEM235A6NFC5 223 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 LANCL1O43813 399 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 PMP2P02689 132 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 OR3A1P47881 315 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 PAPPA-AS1Q5QFB9 102 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 CD300LDQ6UXZ3 194 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 OR4F17Q8NGA8 305 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 HHIPL1Q96JK4 782 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 GLI3P10071 1580 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 OR2T8A6NH00 312 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 MS4A18H0YCH9 400 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 PRRG2O14669 202 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 UTS2O95399 124 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 FPR2P25090 351 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 MS4A18Q3C1V0 323 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 VASH2Q86V25 355 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 NPWQ8N729 165 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 HSD17B11Q8NBQ5 300 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 SLC25A33Q9BSK2 321 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 CHST8Q9H2A9 424 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 YARS2Q9Y2Z4 477 aaKnown RBP5.53□□□□□ -1.52
VPS13D-201ENST00000011700 MMP24Q9Y5R2 645 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 IGLV3-10A0A075B6K4 115 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 LOC102723971A0A1B0GUV8 181 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 GASTP01350 101 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 ELNP15502 786 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 SAXO2Q658L1 398 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 DRAM2Q6UX65 266 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 ANGPTL5Q86XS5 388 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 BLNKQ8WV28 456 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 MRGPRX1Q96LB2 322 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 CNMDO75829 334 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms