RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gm21897J3KMP5 500 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Rac1P63001 192 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Ag2Q3UPL5 249 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Vezf1Q5SXC4 518 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 HepacamQ640R3 418 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Olfr198Q7TS40 306 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 HeltQ7TS99 240 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Gm17324Q8C6J8 137 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 4933402N03RikQ8CDT9 329 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Slc22a22Q8R0S9 554 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Olfr593Q8VF28 327 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Chchd6Q91VN4 273 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Bcdin3dQ91YP1 285 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Marc2Q922Q1 338 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Tmem178aQ9CZ16 297 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Q9D1Z2 194 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Spesp1Q9D5A0 399 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Abhd16aQ9Z1Q2 558 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Gm12117V9GXK0 151 aa20.12■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Muc5acE9QAQ8 3455 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 2610044O15Rik8A0A087WRJ1 410 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Olfr1493-ps1A0A140LHU2 316 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Lcn5A2AJB7 192 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 LexmA2AVQ5 414 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 1700084M14RikB1AT01 78 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Scml2B1AVB3 969 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Olfr115B2RTB9 312 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Vmn2r49D3Z6L3 852 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Olfr610E9Q598 315 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Vmn2r32K7N686 852 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Vmn2r42O35192 852 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Chst3O88199 472 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Il1r1P13504 576 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Znf271P15620 580 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Serpinf1P97298 417 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Tsr3Q5HZH2 323 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Prm3Q62100 101 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 ArsjQ8BM89 598 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Orai1Q8BWG9 304 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 ReltQ8BX43 436 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Nhlrc2Q8BZW8 725 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Ccdc58Q8R3Q6 144 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Olfr648Q8VG19 316 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Olfr131Q8VGC8 314 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Raf1Q99N57 648 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 FtmtQ9D5H4 237 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Ccdc107Q9DCC3 242 aa20.11■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Dopey2Q3UHQ6 2295 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Kiaa1549Q68FD9 1940 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Ighv6-6A0A075B5T3 119 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Igkv4-63A0A0G2JFU6 117 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Ifit3bE9PV48 403 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Zfp988F6VKC7 633 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Gm21411J3KMS0 136 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Gm10881P01642 115 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Dgcr2P98154 548 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Zfp987Q32P14 633 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Gpr135Q7TQP2 457 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 FkrpQ8CG64 494 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Vmn1r32Q8R2D9 302 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Olfr1254Q8VFB1 314 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Scgb3a1Q920D7 104 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Letmd1Q924L1 360 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 GpnmbQ99P91 574 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Supt7lQ9CZV5 412 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Sh3bgrlQ9JJU8 114 aaKnown RBP20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Reep6Q9JM62 201 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 GnmtQ9QXF8 293 aa20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 AtrxQ61687 2476 aaKnown RBP20.1■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Gm29276A0A087WNW5 222 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Gm20792A0A087WRF5 222 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Gm28490A0A087WRT9 222 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Gm21996A0A087WSS9 222 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Calhm1D3Z291 348 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Raet1cO08604 253 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Itln1O88310 313 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Galr2O88854 371 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Igf2P09535 180 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Lyl1P27792 278 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Map2k6P70236 334 aaKnown RBP20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Klhdc2Q4G5Y1 406 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Fbxl2Q8BH16 423 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 C1saQ8CG14 688 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Glyr1Q922P9 546 aaKnown RBP20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Acox3Q9EPL9 700 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Uchl1Q9R0P9 223 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Htra1Q9R118 480 aa20.09■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Olfr65A0A1B0GSF4 315 aa20.08■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Dpy19l1A6X919 746 aa20.08■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Vmn1r13G5E8I3 300 aa20.08■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Hprt1P00493 218 aa20.08■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Rps11P62281 158 aaKnown RBP20.08■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Vax1Q2NKI2 338 aa20.08■□□□□ 0.81
Scn1b-201ENSMUST00000098548 MlanaQ2TA50 113 aa20.08■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Scgb1c1Q7M742 95 aa20.08■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Gm13757Q7TR17 305 aa20.08■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Olfr17Q7TRM9 315 aa20.08■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Cyp51a1Q8K0C4 503 aa20.08■□□□□ 0.81
Scn1b-201ENSMUST00000098548 Olfr642Q924X8 314 aa20.08■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 45.8 ms