RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 C12orf71A8MTZ7 269 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 VGLL3A8MV65 326 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 MCIDASD6RGH6 385 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.48□□□□□ -1.37
SCARB2-226ENST00000640916 KPNA4O00629 521 aaPredicted RBP6.48□□□□□ -1.37
SCARB2-226ENST00000640916 GSC2O15499 205 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 SGCEO43556 437 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 ITM2AO43736 263 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 IFNW1P05000 195 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 HOXB9P17482 250 aaPredicted RBP6.48□□□□□ -1.37
SCARB2-226ENST00000640916 MSR1P21757 451 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 TGM4P49221 684 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 DAP3P51398 398 aaKnown RBP6.48□□□□□ -1.37
SCARB2-226ENST00000640916 RGS8P57771 180 aaPredicted RBP6.48□□□□□ -1.37
SCARB2-226ENST00000640916 CD47Q08722 323 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 TM4SF20Q53R12 229 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 BEND6Q5SZJ8 279 aaPredicted RBP6.48□□□□□ -1.37
SCARB2-226ENST00000640916 COLCA1Q6ZS62 124 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 NANOGNBQ7Z5D8 188 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 TMEM219Q86XT9 240 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 C11orf53Q8IXP5 236 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 CMTM4Q8IZR5 234 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 FAM216BQ8N7L0 139 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 OR4D11Q8NGI4 311 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 AENQ8WTP8 325 aaKnown RBP6.48□□□□□ -1.37
SCARB2-226ENST00000640916 SEH1LQ96EE3 360 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 ZNF583Q96ND8 569 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 CCL13Q99616 98 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 MCHR1Q99705 422 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 PRSS27Q9BQR3 290 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 PRSS22Q9GZN4 317 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 C20orf27Q9GZN8 174 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 PPCSQ9HAB8 311 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 CACYBPQ9HB71 228 aaKnown RBP6.48□□□□□ -1.37
SCARB2-226ENST00000640916 INIPQ9NRY2 104 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 AIG1Q9NVV5 245 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 THUMPD1Q9NXG2 353 aaKnown RBP6.48□□□□□ -1.37
SCARB2-226ENST00000640916 VSX1Q9NZR4 365 aaPredicted RBP6.48□□□□□ -1.37
SCARB2-226ENST00000640916 TAGLN3Q9UI15 199 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 TCF19Q9Y242 345 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 CAPN7Q9Y6W3 813 aa6.48□□□□□ -1.37
SCARB2-226ENST00000640916 TRBV23-1A0A0A0MS06 115 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 A0A1W2PPL8 197 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 NPIPB13A6NJU9 1138 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 NPIPB4C9JG80 1138 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 M0R1W7 72 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 M0R3H8 397 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 RAMP3O60896 148 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 IGF2P01344 180 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 SHBGP04278 402 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 HIST1H2ABP04908 130 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 UMPSP11172 480 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 LBPP18428 481 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 THBS3P49746 956 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 NCALDP61601 193 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 LRRC74AQ0VAA2 488 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 WDR38Q5JTN6 314 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 ENTPD8Q5MY95 495 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 LDLRAD2Q5SZI1 272 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 INTS11Q5TA45 600 aaKnown RBP6.47□□□□□ -1.37
SCARB2-226ENST00000640916 NCR3LG1Q68D85 454 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 OGFOD2Q6N063 350 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 TTC33Q6PID6 262 aaPredicted RBP6.47□□□□□ -1.37
SCARB2-226ENST00000640916 TRMT10CQ7L0Y3 403 aaKnown RBP6.47□□□□□ -1.37
SCARB2-226ENST00000640916 HIST3H2AQ7L7L0 130 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 HDDC2Q7Z4H3 204 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 RBM45Q8IUH3 476 aaKnown RBP6.47□□□□□ -1.37
SCARB2-226ENST00000640916 ZNF781Q8N8C0 355 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 OR5L1Q8NGL2 311 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 OR6T1Q8NGN1 323 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 NFKBIDQ8NI38 313 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 TCP10LQ8TDR4 215 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 HIST1H2ACQ93077 130 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 ANAPC16Q96DE5 110 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 CPPED1Q9BRF8 314 aaPredicted RBP6.47□□□□□ -1.37
SCARB2-226ENST00000640916 WACQ9BTA9 647 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 ALG12Q9BV10 488 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 NUF2Q9BZD4 464 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 TXNIPQ9H3M7 391 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 METTL8Q9H825 291 aaKnown RBP6.47□□□□□ -1.37
SCARB2-226ENST00000640916 EDA2RQ9HAV5 297 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 ADA2Q9NZK5 511 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 ANGPT4Q9Y264 503 aa6.47□□□□□ -1.37
SCARB2-226ENST00000640916 SF3B6Q9Y3B4 125 aaKnown RBP6.47□□□□□ -1.37
SCARB2-226ENST00000640916 HECTD4Q9Y4D8 3996 aa6.46□□□□□ -1.37
SCARB2-226ENST00000640916 GMNCA6NCL1 334 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 FAM90A8PA6NJQ4 464 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 CPSF4LA6NMK7 179 aaKnown RBP6.46□□□□□ -1.38
SCARB2-226ENST00000640916 ACOT8O14734 319 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 OR7A10O76100 309 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 FUT1P19526 365 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 CA6P23280 308 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 ANOS1P23352 680 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 VDAC2P45880 294 aaPredicted RBP6.46□□□□□ -1.38
SCARB2-226ENST00000640916 IL5RAQ01344 420 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 SCRN3Q0VDG4 424 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 MPP2Q14168 576 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 GK2Q14410 553 aaPredicted RBP6.46□□□□□ -1.38
SCARB2-226ENST00000640916 PCK2Q16822 640 aa6.46□□□□□ -1.38
SCARB2-226ENST00000640916 KRTAP27-1Q3LI81 207 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms