RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 KIR2DS1Q14954 304 aa2.87□□□□□ -1.95
RTTN-217ENST00000640393 RNASE13Q5GAN3 156 aaKnown RBP2.87□□□□□ -1.95
RTTN-217ENST00000640393 SPANXN2Q5MJ10 180 aa2.87□□□□□ -1.95
RTTN-217ENST00000640393 UNQ9165/PRO28630Q6UXU0 137 aa2.87□□□□□ -1.95
RTTN-217ENST00000640393 EIF3MQ7L2H7 374 aaKnown RBP2.87□□□□□ -1.95
RTTN-217ENST00000640393 TMCO2Q7Z6W1 182 aaPredicted RBP2.87□□□□□ -1.95
RTTN-217ENST00000640393 PDCL2Q8N4E4 241 aa2.87□□□□□ -1.95
RTTN-217ENST00000640393 MIR7-3HGQ8N6C7 128 aa2.87□□□□□ -1.95
RTTN-217ENST00000640393 FAM184AQ8NB25 1140 aa2.87□□□□□ -1.95
RTTN-217ENST00000640393 PEX13Q92968 403 aa2.87□□□□□ -1.95
RTTN-217ENST00000640393 DYNLL2Q96FJ2 89 aa2.87□□□□□ -1.95
RTTN-217ENST00000640393 PRRC1Q96M27 445 aa2.87□□□□□ -1.95
RTTN-217ENST00000640393 MTG1Q9BT17 334 aaPredicted RBP2.87□□□□□ -1.95
RTTN-217ENST00000640393 RSG1Q9BU20 258 aa2.87□□□□□ -1.95
RTTN-217ENST00000640393 NEK6Q9HC98 313 aa2.87□□□□□ -1.95
RTTN-217ENST00000640393 GCNT4Q9P109 453 aa2.87□□□□□ -1.95
RTTN-217ENST00000640393 SHANK1Q9Y566 2161 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 NINLQ9Y2I6 1382 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 BAZ1BQ9UIG0 1483 aaKnown RBP2.86□□□□□ -1.95
RTTN-217ENST00000640393 CHD1O14646 1710 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 TRBV11-1A0A0K0K1C0 115 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 SUPT3HB4E1H0 165 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 TEX46H3BTG2 121 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 K7EMT4 169 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 CASC3O15234 703 aaKnown RBP2.86□□□□□ -1.95
RTTN-217ENST00000640393 HUS1O60921 280 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 CDH16O75309 829 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 KRT14P02533 472 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 IGKV4-1P06312 121 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 CASQ1P31415 396 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 UQCRFS1P47985 274 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 C21orf59P57076 290 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 RGS8P57771 180 aaPredicted RBP2.86□□□□□ -1.95
RTTN-217ENST00000640393 SLC39A6Q13433 755 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 TPTE2P1Q5T6R2 138 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 TTC19Q6DKK2 380 aaPredicted RBP2.86□□□□□ -1.95
RTTN-217ENST00000640393 C16orf87Q6PH81 154 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 CALHM3Q86XJ0 350 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 ZNF645Q8N7E2 425 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 TMEM105Q8N8V8 129 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 RNF145Q96MT1 663 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 SLIRPQ9GZT3 109 aaKnown RBP2.86□□□□□ -1.95
RTTN-217ENST00000640393 MRM3Q9HC36 420 aaKnown RBP2.86□□□□□ -1.95
RTTN-217ENST00000640393 MED4Q9NPJ6 270 aa2.86□□□□□ -1.95
RTTN-217ENST00000640393 CHTOPQ9Y3Y2 248 aaKnown RBP2.86□□□□□ -1.95
RTTN-217ENST00000640393 BAZ2AQ9UIF9 1905 aaKnown RBP2.86□□□□□ -1.95
RTTN-217ENST00000640393 CENPVL3A0A0U1RRI6 287 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 FAM25EA8MYX2 175 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 SCAMP2O15127 329 aaKnown RBP2.85□□□□□ -1.95
RTTN-217ENST00000640393 EIF1BO60739 113 aaKnown RBP2.85□□□□□ -1.95
RTTN-217ENST00000640393 CTAG2O75638 210 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 CCNB2O95067 398 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 LSM8O95777 96 aaKnown RBP2.85□□□□□ -1.95
RTTN-217ENST00000640393 CT45A6P0DMU7 189 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 CT45A5P0DMU8 189 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 CT45A7P0DMV0 189 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 RALBP11234 206 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 EIF1P41567 113 aaKnown RBP2.85□□□□□ -1.95
RTTN-217ENST00000640393 CT45A1Q5HYN5 189 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 KATNAL2Q8IYT4 538 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 OR52K1Q8NGK4 314 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 OR6Q1Q8NGQ2 317 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 CT45A3Q8NHU0 189 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 ANP32BQ92688 251 aaKnown RBP2.85□□□□□ -1.95
RTTN-217ENST00000640393 MCUR1Q96AQ8 359 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 KIAA1143Q96AT1 154 aaPredicted RBP2.85□□□□□ -1.95
RTTN-217ENST00000640393 BPIFA3Q9BQP9 254 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 ANKRD60Q9BZ19 345 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 ACTR3CQ9C0K3 210 aaPredicted RBP2.85□□□□□ -1.95
RTTN-217ENST00000640393 TMEM185BQ9H7F4 350 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 EXOSC4Q9NPD3 245 aaKnown RBP2.85□□□□□ -1.95
RTTN-217ENST00000640393 C21orf62Q9NYP8 219 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 CBY1Q9Y3M2 126 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 CEP164Q9UPV0 1460 aa2.85□□□□□ -1.95
RTTN-217ENST00000640393 ZNF608Q9ULD9 1512 aaPredicted RBP2.85□□□□□ -1.95
RTTN-217ENST00000640393 SMARCA4P51532 1647 aa2.84□□□□□ -1.95
RTTN-217ENST00000640393 IGHV1-69DA0A0B4J2H0 117 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 OR5H1A6NKK0 313 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 AKR7A2O43488 359 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 CHST1O43916 411 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 NMT2O60551 498 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 RPS5P46782 204 aaKnown RBP2.84□□□□□ -1.96
RTTN-217ENST00000640393 GFERP55789 205 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 CARD18P57730 90 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 PRR3P79522 188 aaKnown RBP2.84□□□□□ -1.96
RTTN-217ENST00000640393 TMED1Q13445 227 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 ZCCHC6Q5VYS8 1495 aaKnown RBP2.84□□□□□ -1.96
RTTN-217ENST00000640393 UBN2Q6ZU65 1347 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 CENPQQ7L2Z9 268 aaPredicted RBP2.84□□□□□ -1.96
RTTN-217ENST00000640393 OR5K2Q8NHB8 316 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 NRBF2Q96F24 287 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 CHP1Q99653 195 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 LZTS2Q9BRK4 669 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 TMEM243Q9BU79 118 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 TMEM38AQ9H6F2 299 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 CYP3A43Q9HB55 503 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 FANCEQ9HB96 536 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 SLC39A1Q9NY26 324 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 AHSPQ9NZD4 102 aa2.84□□□□□ -1.96
RTTN-217ENST00000640393 PDP1Q9P0J1 537 aaPredicted RBP2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms