RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ANKUB1A6NFN9 424 aa12.96□□□□□ -0.34
SCARB2-216ENST00000639300 SNRPGP15A8MWD9 76 aa12.96□□□□□ -0.34
SCARB2-216ENST00000639300 GLSO94925 669 aaPredicted RBP12.96□□□□□ -0.34
SCARB2-216ENST00000639300 IFNA17P01571 189 aa12.96□□□□□ -0.34
SCARB2-216ENST00000639300 ZNF79Q15937 498 aa12.96□□□□□ -0.34
SCARB2-216ENST00000639300 CDONQ4KMG0 1287 aa12.96□□□□□ -0.34
SCARB2-216ENST00000639300 LPCAT3Q6P1A2 487 aa12.96□□□□□ -0.34
SCARB2-216ENST00000639300 ABHD5Q8WTS1 349 aa12.96□□□□□ -0.34
SCARB2-216ENST00000639300 PPP1R1CQ8WVI7 109 aa12.96□□□□□ -0.34
SCARB2-216ENST00000639300 TWSG1Q9GZX9 223 aa12.96□□□□□ -0.34
SCARB2-216ENST00000639300 A0A0U1RQK1 487 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 KLRC4-KLRK1H3BQV0 150 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 MGMTP16455 207 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 IDH3GP51553 393 aaPredicted RBP12.95□□□□□ -0.34
SCARB2-216ENST00000639300 CLDN15P56746 228 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.95□□□□□ -0.34
SCARB2-216ENST00000639300 ZNF770Q6IQ21 691 aaPredicted RBP12.95□□□□□ -0.34
SCARB2-216ENST00000639300 SEH1LQ96EE3 360 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 ST6GAL2Q96JF0 529 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 MENTQ9BUN1 341 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 MOB1AQ9H8S9 216 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 MRM2Q9UI43 246 aaKnown RBP12.95□□□□□ -0.34
SCARB2-216ENST00000639300 HDGFL3Q9Y3E1 203 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 HSPB2A8KAH6 182 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 HSPB2Q16082 182 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 PXDC1Q5TGL8 231 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 TMEM91Q6ZNR0 172 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 VASH2Q86V25 355 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 LGI3Q8N145 548 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 NPEPL1Q8NDH3 523 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 ST8SIA4Q92187 359 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 MARC2Q969Z3 335 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 KCNK15Q9H427 330 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 FSCN3Q9NQT6 498 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 GMDSO60547 372 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 SLC38A9Q8NBW4 561 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 YIPF5Q969M3 257 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 NECAP2Q9NVZ3 263 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 TIMM10BQ9Y5J6 103 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 CACNA1DQ01668 2161 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 SULT1C2O00338 296 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 NRASP01111 189 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 CT45A8P0DMV1 189 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 CT45A9P0DMV2 189 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 ZNF133P52736 654 aaPredicted RBP12.95□□□□□ -0.34
SCARB2-216ENST00000639300 MRPS34P82930 218 aaKnown RBP12.95□□□□□ -0.34
SCARB2-216ENST00000639300 SNTB1Q13884 538 aaKnown RBP12.95□□□□□ -0.34
SCARB2-216ENST00000639300 CT45A2Q5DJT8 189 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 SFRP5Q5T4F7 317 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 CADM4Q8NFZ8 388 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 OR1J2Q8NGS2 313 aa12.95□□□□□ -0.34
SCARB2-216ENST00000639300 CPNE4Q96A23 557 aaPredicted RBP12.95□□□□□ -0.34
SCARB2-216ENST00000639300 SIRT4Q9Y6E7 314 aaPredicted RBP12.95□□□□□ -0.34
SCARB2-216ENST00000639300 TNFSF14O43557 240 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 IGHA1P01876 353 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 ACOT7LQ6ZUV0 252 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 SLC25A26Q70HW3 274 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 KCNRGQ8N5I3 272 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 OR10AC1Q8NH08 325 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 LHX6Q9UPM6 363 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 FOXJ3Q9UPW0 622 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 TIMM8AO60220 97 aaPredicted RBP12.94□□□□□ -0.34
SCARB2-216ENST00000639300 MSL3P1P0C860 447 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 OR5H8P0DN80 308 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 NXPH1P58417 271 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 CEACAM16Q2WEN9 425 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 PAN3Q58A45 887 aaKnown RBP12.94□□□□□ -0.34
SCARB2-216ENST00000639300 SLC22A25Q6T423 547 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 DEFB123Q8N688 67 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 OR52H1Q8NGJ2 320 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 CRLF2Q9HC73 371 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 PCOLCE2Q9UKZ9 415 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 POLEQ07864 2286 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 LGALS8O00214 317 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 PRKACAP17612 351 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 PRSS12P56730 875 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 CLN3Q13286 438 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 DGAT2L6Q6ZPD8 337 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 OR51A4Q8NGJ6 313 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 GCM1Q9NP62 436 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 MYOTQ9UBF9 498 aa12.94□□□□□ -0.34
SCARB2-216ENST00000639300 C5orf49A4QMS7 147 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 TUSC2O75896 110 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 WIPI1Q5MNZ9 446 aaPredicted RBP12.93□□□□□ -0.34
SCARB2-216ENST00000639300 PWWP2BQ6NUJ5 590 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 MTFP1Q9UDX5 166 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 LOXL2Q9Y4K0 774 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 FLVCR1Q9Y5Y0 555 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 MYO16Q9Y6X6 1858 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 CNR1P21554 472 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 PDCD1Q15116 288 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 LSMEM1Q8N8F7 131 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 MUCL1Q96DR8 90 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 FAM234AQ9H0X4 552 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 PLEKHA3Q9HB20 300 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 RPS10-NUDT3A0A1W2PQS6 291 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 HSD17B6O14756 317 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 MBTPS2O43462 519 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 FOXS1O43638 330 aa12.93□□□□□ -0.34
SCARB2-216ENST00000639300 CBR3O75828 277 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms