RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 ZNF432O94892 652 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 KIR2DL2P43627 348 aaPredicted RBP7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 ASCL1P50553 236 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 RPS23P62266 143 aaKnown RBP7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 RPS4XP62701 263 aaKnown RBP7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 SFRP5Q5T4F7 317 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 MZT2BQ6NZ67 158 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 CEACAM19Q7Z692 300 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 DPPA2Q7Z7J5 298 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 P2RY8Q86VZ1 359 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 ZNF679Q8IYX0 411 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 OTOSQ8NHW6 89 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 S100PBPQ96BU1 408 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 Q9UFV3 132 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 HHLA2Q9UM44 414 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 MYO18BQ8IUG5 2567 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 A0A1B0GVC2 190 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 F8W036 122 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 H3BSA7 217 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 ARL6IP5O75915 188 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 COX6B1P14854 86 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 ABLIM2Q6H8Q1 611 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 MDP1Q86V88 176 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 SKA3Q8IX90 412 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 PNLDC1Q8NA58 520 aaKnown RBP7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 PIK3IP1Q96FE7 263 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 ADGRG7Q96K78 797 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 PAPOLGQ9BWT3 736 aaKnown RBP7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 PALMDQ9NP74 551 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 ERVK13-1Q9NX77 482 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 SLCO1C1Q9NYB5 712 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 OR52A1Q9UKL2 312 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 CADP27708 2225 aa7.54□□□□□ -1.2
CACNA1A-254ENST00000637952 ZNF879B4DU55 563 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 P2RY10O00398 339 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 KLF4O43474 513 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 SS18L1O75177 396 aaPredicted RBP7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 CLDN14O95500 239 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 TNFSF4P23510 183 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 LSM6P62312 80 aaKnown RBP7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 ZNF718Q3SXZ3 478 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 YIF1BQ5BJH7 314 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 ZNF367Q7RTV3 350 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 CLCF1Q9UBD9 225 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 MBD3L4A6NDZ8 208 aaPredicted RBP7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 MBD3L3A6NE82 208 aaPredicted RBP7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 MBD3L5A6NJ08 208 aaPredicted RBP7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 FAM25AB3EWG3 89 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 FAM25CB3EWG5 89 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 FAM25GB3EWG6 89 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 J3QKU1 62 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 TXNDC12O95881 172 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 CD8BP10966 210 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 MAPK3P27361 379 aaPredicted RBP7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 RGS6P49758 472 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 H3F3AP84243 136 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 RGS7BPQ6MZT1 257 aaPredicted RBP7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 PAMR1Q6UXH9 720 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 ZNF101Q8IZC7 436 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 MS4A15Q8N5U1 240 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 MBD3L2Q8NHZ7 208 aaPredicted RBP7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 GPR148Q8TDV2 347 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 RNF138Q8WVD3 245 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 TMEM45BQ96B21 275 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 ZNF837Q96EG3 531 aaPredicted RBP7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 MS4A3Q96HJ5 214 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 RHNO1Q9BSD3 238 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 MOV10Q9HCE1 1003 aaKnown RBP7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 GSN-AS1Q9NRJ2 163 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 ACOXLQ9NUZ1 547 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 FZR1Q9UM11 496 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 IGHV3-64DA0A0J9YX35 117 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 A6NIN4 97 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 TFP02787 698 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 CSTBP04080 98 aaKnown RBP7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 IRF2P14316 349 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 GABARAPL2P60520 117 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 SNTB2Q13425 540 aaKnown RBP7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 RAB35Q15286 201 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 C4orf17Q53FE4 359 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 TOR2AQ5JU69 321 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 FAM27BQ5VT28 67 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 SLC25A47Q6Q0C1 308 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 OR1K1Q8NGR3 316 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 ZNF519Q8TB69 540 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 HAVCR2Q8TDQ0 301 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 HSD17B8Q92506 261 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 STARD4Q96DR4 205 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 COQ7Q99807 217 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 PTTG3PQ9NZH4 202 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 FOXD3Q9UJU5 478 aaPredicted RBP7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 FBXL3Q9UKT7 428 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 UGT2A1Q9Y4X1 527 aa7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 PHF3Q92576 2039 aaKnown RBP7.53□□□□□ -1.2
CACNA1A-254ENST00000637952 SMIM30A4D0T7 59 aa7.52□□□□□ -1.2
CACNA1A-254ENST00000637952 ETV2O00321 342 aaPredicted RBP7.52□□□□□ -1.2
CACNA1A-254ENST00000637952 WBP4O75554 376 aaKnown RBP7.52□□□□□ -1.2
CACNA1A-254ENST00000637952 TP53P04637 393 aaPredicted RBP7.52□□□□□ -1.2
CACNA1A-254ENST00000637952 CST2P09228 141 aa7.52□□□□□ -1.2
CACNA1A-254ENST00000637952 MAP2K3P46734 347 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms