RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 TRAM1Q15629 374 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 ZBTB37Q5TC79 503 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 MBNL2Q5VZF2 373 aaKnown RBP5.8□□□□□ -1.48
UPF3B-205ENST00000636792 RPL22L1Q6P5R6 122 aaKnown RBP5.8□□□□□ -1.48
UPF3B-205ENST00000636792 CORO6Q6QEF8 472 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 FBXW12Q6X9E4 464 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 B3GLCTQ6Y288 498 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF704Q6ZNC4 412 aaPredicted RBP5.8□□□□□ -1.48
UPF3B-205ENST00000636792 Q6ZSR3 168 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 KRT74Q7RTS7 529 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF367Q7RTV3 350 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF283Q8N7M2 679 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 NANOGP1Q8N7R0 232 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF485Q8NCK3 441 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 CPEB3Q8NE35 698 aaKnown RBP5.8□□□□□ -1.48
UPF3B-205ENST00000636792 FGFBP3Q8TAT2 258 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 AKAP1Q92667 903 aaKnown RBP eCLIP5.8□□□□□ -1.48
UPF3B-205ENST00000636792 SPSB4Q96A44 273 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 PELI1Q96FA3 418 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 MISP3Q96FF7 219 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 PLPPR2Q96GM1 343 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 C4orf36Q96KX1 117 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 FOXN4Q96NZ1 517 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF649Q9BS31 505 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 COMMD4Q9H0A8 199 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 AMBNQ9NP70 447 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 CENPMQ9NSP4 180 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 UBAP1Q9NZ09 502 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 MRM2Q9UI43 246 aaKnown RBP5.8□□□□□ -1.48
UPF3B-205ENST00000636792 GPR160Q9UJ42 338 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 R4GMQ9 66 aa5.8□□□□□ -1.48
UPF3B-205ENST00000636792 ICE1Q9Y2F5 2266 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 LRRK2Q5S007 2527 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 PLCE1Q9P212 2302 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 IGLV3-9A0A075B6K5 115 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 TMEM269A0A1B0GVZ9 245 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 MAGEA13PA6NCF6 341 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 DPRXA6NFQ7 191 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 SHISA9B4DS77 424 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 C19orf84I3L1E1 186 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 GPRIN2O60269 458 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 IGLV3-1P01715 115 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 RNF224P0DH78 156 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 PSKH1P11801 424 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 RAC2P15153 192 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF250P15622 560 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 RAB6AP20340 208 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 CCL1P22362 96 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 GALP22466 123 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 MAPK3P27361 379 aaPredicted RBP5.79□□□□□ -1.48
UPF3B-205ENST00000636792 LOXP28300 417 aaPredicted RBP5.79□□□□□ -1.48
UPF3B-205ENST00000636792 RPS27P42677 84 aaKnown RBP5.79□□□□□ -1.48
UPF3B-205ENST00000636792 SLC6A9P48067 706 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 CX3CR1P49238 355 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 TUBA1BP68363 451 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 MLLT11Q13015 90 aaPredicted RBP5.79□□□□□ -1.48
UPF3B-205ENST00000636792 SPHARQ15513 63 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 EFNB3Q15768 340 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF718Q3SXZ3 478 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF672Q499Z4 452 aaPredicted RBP5.79□□□□□ -1.48
UPF3B-205ENST00000636792 TMEM244Q5VVB8 128 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 UBE2UQ5VVX9 321 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 LIPNQ5VXI9 398 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 RGS7BPQ6MZT1 257 aaPredicted RBP5.79□□□□□ -1.48
UPF3B-205ENST00000636792 SLC22A25Q6T423 547 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 LRRN1Q6UXK5 716 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 TUBA1AQ71U36 451 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 SSX6Q7RTT6 188 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 PRSS45Q7RTY3 260 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.79□□□□□ -1.48
UPF3B-205ENST00000636792 KLBQ86Z14 1044 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 ELMOD2Q8IZ81 293 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 ZNF611Q8N823 705 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 YIPF7Q8N8F6 280 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 CSNK2A3Q8NEV1 391 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 AKR7LQ8NHP1 331 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 LINC01560Q8TB33 94 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 FBXW5Q969U6 566 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 SMIM19Q96E16 107 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 ZC3HAV1LQ96H79 300 aaKnown RBP5.79□□□□□ -1.48
UPF3B-205ENST00000636792 TECTBQ96PL2 329 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 AMELYQ99218 206 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 TBX5Q99593 518 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 SLC22A4Q9H015 551 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 OR10A2Q9H208 303 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 CYSLTR2Q9NS75 346 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 PAK1IP1Q9NWT1 392 aaPredicted RBP5.79□□□□□ -1.48
UPF3B-205ENST00000636792 FAM206AQ9NX38 181 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 BABAM2Q9NXR7 383 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 SLCO1C1Q9NYB5 712 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 PLEKHB1Q9UF11 243 aaPredicted RBP5.79□□□□□ -1.48
UPF3B-205ENST00000636792 GNG8Q9UK08 70 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 KLHDC2Q9Y2U9 406 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 LSM2Q9Y333 95 aaKnown RBP5.79□□□□□ -1.48
UPF3B-205ENST00000636792 DOPEY2Q9Y3R5 2298 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 CADP27708 2225 aa5.79□□□□□ -1.48
UPF3B-205ENST00000636792 PKDREJQ9NTG1 2253 aa5.78□□□□□ -1.48
UPF3B-205ENST00000636792 A0A1W2PR80 420 aa5.78□□□□□ -1.48
UPF3B-205ENST00000636792 PTGES3LE9PB15 166 aa5.78□□□□□ -1.48
UPF3B-205ENST00000636792 ATP6V1G2-DDX39BF2Z307 99 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms