RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 MZT1Q08AG7 82 aa15.03■□□□□ -0
PNKP-225ENST00000636214 PPP1R8Q12972 351 aaKnown RBP15.03■□□□□ -0
PNKP-225ENST00000636214 TRIM25Q14258 630 aaKnown RBP15.03■□□□□ -0
PNKP-225ENST00000636214 KCNJ8Q15842 424 aa15.03■□□□□ -0
PNKP-225ENST00000636214 LCN8Q6JVE9 175 aa15.03■□□□□ -0
PNKP-225ENST00000636214 NAA40Q86UY6 237 aa15.03■□□□□ -0
PNKP-225ENST00000636214 TEX47Q8TBZ9 253 aa15.03■□□□□ -0
PNKP-225ENST00000636214 ZMYND19Q96E35 227 aaPredicted RBP15.03■□□□□ -0
PNKP-225ENST00000636214 CCT8L2Q96SF2 557 aa15.03■□□□□ -0
PNKP-225ENST00000636214 TMEM246Q9BRR3 403 aa15.03■□□□□ -0
PNKP-225ENST00000636214 ADAT1Q9BUB4 502 aaKnown RBP15.03■□□□□ -0
PNKP-225ENST00000636214 MS4A7Q9GZW8 240 aaPredicted RBP15.03■□□□□ -0
PNKP-225ENST00000636214 FN3KRPQ9HA64 309 aa15.03■□□□□ -0
PNKP-225ENST00000636214 TMEM165Q9HC07 324 aa15.03■□□□□ -0
PNKP-225ENST00000636214 UFSP2Q9NUQ7 469 aa15.03■□□□□ -0
PNKP-225ENST00000636214 CLN8Q9UBY8 286 aa15.03■□□□□ -0
PNKP-225ENST00000636214 N6AMT1Q9Y5N5 214 aa15.03■□□□□ -0
PNKP-225ENST00000636214 COMMD3-BMI1R4GMX3 469 aa15.03■□□□□ -0
PNKP-225ENST00000636214 U3KQV3 271 aa15.03■□□□□ -0
PNKP-225ENST00000636214 CD300LBA8K4G0 201 aa15.02■□□□□ -0
PNKP-225ENST00000636214 ZNF878C9JN71 531 aa15.02■□□□□ -0
PNKP-225ENST00000636214 SOX14O95416 240 aa15.02■□□□□ -0
PNKP-225ENST00000636214 CA6P23280 308 aa15.02■□□□□ -0
PNKP-225ENST00000636214 CD200P41217 278 aa15.02■□□□□ -0
PNKP-225ENST00000636214 SLC15A1P46059 708 aa15.02■□□□□ -0
PNKP-225ENST00000636214 PITPNBP48739 271 aa15.02■□□□□ -0
PNKP-225ENST00000636214 PRKXP51817 358 aa15.02■□□□□ -0
PNKP-225ENST00000636214 CRMP1Q14194 572 aa15.02■□□□□ -0
PNKP-225ENST00000636214 MICAQ29983 383 aa15.02■□□□□ -0
PNKP-225ENST00000636214 ZNF404Q494X3 552 aa15.02■□□□□ -0
PNKP-225ENST00000636214 ZNF770Q6IQ21 691 aaPredicted RBP15.02■□□□□ -0
PNKP-225ENST00000636214 FITM2Q8N6M3 262 aa15.02■□□□□ -0
PNKP-225ENST00000636214 CCDC197Q8NCU1 140 aa15.02■□□□□ -0
PNKP-225ENST00000636214 OR8D4Q8NGM9 314 aa15.02■□□□□ -0
PNKP-225ENST00000636214 SLAMF6Q96DU3 332 aa15.02■□□□□ -0
PNKP-225ENST00000636214 DGCR6LQ9BY27 220 aa15.02■□□□□ -0
PNKP-225ENST00000636214 MMADHCQ9H3L0 296 aaPredicted RBP15.02■□□□□ -0
PNKP-225ENST00000636214 OPA3Q9H6K4 179 aa15.02■□□□□ -0
PNKP-225ENST00000636214 SP140LQ9H930 580 aa15.02■□□□□ -0
PNKP-225ENST00000636214 TCRBV5S2A0A599 114 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 TMEM89A2RUT3 159 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 ZNF593O00488 134 aaPredicted RBP15.01□□□□□ -0.01
PNKP-225ENST00000636214 TBX1O43435 398 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 GMDSO60547 372 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 FSTL3O95633 263 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 GYPBP06028 91 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 RAP2AP10114 183 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 SPI1P17947 270 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 HSD11B1P28845 292 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 COMPP49747 757 aaPredicted RBP15.01□□□□□ -0.01
PNKP-225ENST00000636214 SLC25A1P53007 311 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 UBA52P62987 128 aaKnown RBP15.01□□□□□ -0.01
PNKP-225ENST00000636214 GRB2P62993 217 aaKnown RBP15.01□□□□□ -0.01
PNKP-225ENST00000636214 GK3PQ14409 553 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 PRAMEF6Q5VXH4 476 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 DCDC5Q6ZRR9 648 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 SIGLECL1Q8N7X8 197 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 SPERTQ8NA61 448 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 OR10G2Q8NGC3 310 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 OR10S1Q8NGN2 331 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 OR2AE1Q8NHA4 323 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 Q8TCH9 128 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 OTULINQ96BN8 352 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 CCDC124Q96CT7 223 aaKnown RBP15.01□□□□□ -0.01
PNKP-225ENST00000636214 KCNJ15Q99712 375 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 ZMAT3Q9HA38 289 aaKnown RBP15.01□□□□□ -0.01
PNKP-225ENST00000636214 ARMC1Q9NVT9 282 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 MRPL15Q9P015 296 aaKnown RBP15.01□□□□□ -0.01
PNKP-225ENST00000636214 RNF7Q9UBF6 113 aa15.01□□□□□ -0.01
PNKP-225ENST00000636214 PRPF19Q9UMS4 504 aaKnown RBP15.01□□□□□ -0.01
PNKP-225ENST00000636214 IGHV2-70DA0A0C4DH43 119 aa15□□□□□ -0.01
PNKP-225ENST00000636214 A0A1B0GWJ7 208 aa15□□□□□ -0.01
PNKP-225ENST00000636214 H3BN98 237 aa15□□□□□ -0.01
PNKP-225ENST00000636214 GNGT2O14610 69 aa15□□□□□ -0.01
PNKP-225ENST00000636214 PHYHO14832 338 aa15□□□□□ -0.01
PNKP-225ENST00000636214 XRCC2O43543 280 aa15□□□□□ -0.01
PNKP-225ENST00000636214 FAM20BO75063 409 aa15□□□□□ -0.01
PNKP-225ENST00000636214 PAICSP22234 425 aaKnown RBP15□□□□□ -0.01
PNKP-225ENST00000636214 MTNR1AP48039 350 aa15□□□□□ -0.01
PNKP-225ENST00000636214 ZNF92Q03936 586 aa15□□□□□ -0.01
PNKP-225ENST00000636214 MAB21L1Q13394 359 aa15□□□□□ -0.01
PNKP-225ENST00000636214 SNAI3Q3KNW1 292 aa15□□□□□ -0.01
PNKP-225ENST00000636214 FAM201AQ5SY85 155 aa15□□□□□ -0.01
PNKP-225ENST00000636214 GLYATL3Q5SZD4 288 aa15□□□□□ -0.01
PNKP-225ENST00000636214 LYPD4Q6UWN0 246 aa15□□□□□ -0.01
PNKP-225ENST00000636214 ZDHHC22Q8N966 263 aa15□□□□□ -0.01
PNKP-225ENST00000636214 BOLLQ8N9W6 283 aaKnown RBP15□□□□□ -0.01
PNKP-225ENST00000636214 ZNF511Q8NB15 262 aa15□□□□□ -0.01
PNKP-225ENST00000636214 RAB40AQ8WXH6 277 aa15□□□□□ -0.01
PNKP-225ENST00000636214 DVL3Q92997 716 aaPredicted RBP15□□□□□ -0.01
PNKP-225ENST00000636214 ASB9Q96DX5 294 aa15□□□□□ -0.01
PNKP-225ENST00000636214 DDOQ99489 341 aa15□□□□□ -0.01
PNKP-225ENST00000636214 TRIM36Q9NQ86 728 aa15□□□□□ -0.01
PNKP-225ENST00000636214 KIF17Q9P2E2 1029 aa15□□□□□ -0.01
PNKP-225ENST00000636214 ZNF69Q9UC07 566 aa15□□□□□ -0.01
PNKP-225ENST00000636214 TENM1Q9UKZ4 2725 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 A6NLC8 198 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 ANKRD30BLA7E2S9 258 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 CST1P01037 141 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 APOC1P02654 83 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms