RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 RACK1P63244 317 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-208ENST00000629380 ANGPTL5Q86XS5 388 aa12.03□□□□□ -0.48
SYNGAP1-208ENST00000629380 SEC22AQ96IW7 307 aa12.03□□□□□ -0.48
SYNGAP1-208ENST00000629380 UBE2L5PA0A1B0GUS4 154 aa12.03□□□□□ -0.48
SYNGAP1-208ENST00000629380 KRTDAPP60985 99 aa12.03□□□□□ -0.48
SYNGAP1-208ENST00000629380 OR2G6Q5TZ20 316 aa12.03□□□□□ -0.48
SYNGAP1-208ENST00000629380 LAIR1Q6GTX8 287 aa12.03□□□□□ -0.48
SYNGAP1-208ENST00000629380 ZNF835Q9Y2P0 537 aa12.03□□□□□ -0.48
SYNGAP1-208ENST00000629380 GUK1Q16774 197 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 PRTGQ2VWP7 1150 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 TRMT12Q53H54 448 aaKnown RBP12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 NCR3LG1Q68D85 454 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 TMEM230Q96A57 120 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 C11orf54Q9H0W9 315 aaPredicted RBP12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 LINC00597Q9H2U6 94 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 PDZD11Q5EBL8 140 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 ATP23Q9Y6H3 246 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 MS4A18H0YCH9 400 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 DCTN6O00399 190 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 TOX3O15405 576 aaPredicted RBP12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 EFSO43281 561 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 PSMB6P28072 239 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 FOXA1P55317 472 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 MS4A18Q3C1V0 323 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 DRAM2Q6UX65 266 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 RASD2Q96D21 266 aa12.02□□□□□ -0.48
SYNGAP1-208ENST00000629380 SMAD6O43541 496 aaKnown RBP12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 CRISP2P16562 243 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 OR2A2Q6IF42 318 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 BHLHE23Q8NDY6 225 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 PIGTQ969N2 578 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 HS3ST3A1Q9Y663 406 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 LBHQ53QV2 105 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 RPUSD4Q96CM3 377 aaKnown RBP12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 NBASA2RRP1 2371 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 GLRA1P23415 457 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 RPEL1Q2QD12 228 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 MFSD4AQ8N468 514 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 LMO3Q8TAP4 145 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 ZNF2Q9BSG1 426 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 PKDREJQ9NTG1 2253 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 SELENOFO60613 162 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 KIAA1024LP59773 190 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 ANKRD61A6NGH8 418 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 DRGXA6NNA5 263 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 PSMB5P28074 263 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 TRAT1Q6PIZ9 186 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 ERGIC1Q969X5 290 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 SLC46A2Q9BY10 475 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 CHST8Q9H2A9 424 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 LHX3Q9UBR4 397 aa12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 KLF13Q9Y2Y9 288 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-208ENST00000629380 MEIKINA0A087WXM9 373 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 ARNTP27540 789 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 TUSC1Q2TAM9 212 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 SPANXN5Q5MJ07 72 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 OR4F17Q8NGA8 305 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 THOC3Q96J01 351 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 NPAS1Q99742 590 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 LRFN3Q9BTN0 628 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 NTNG1Q9Y2I2 539 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 LRRK1Q38SD2 2015 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 CACNA1HO95180 2353 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 DSCR3O14972 297 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 IL2RAP01589 272 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 PIPP12273 146 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 PNLIPRP3Q17RR3 467 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 LINC00696Q6ZRV3 163 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 FBXO27Q8NI29 283 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 TMEM147Q9BVK8 224 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 KCNK15Q9H427 330 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 HRH3Q9Y5N1 445 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 M0R1B8 84 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 HOXD9P28356 352 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 HTR6P50406 440 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 GP2P55259 537 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 HERVK_113P61574 105 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 OR13F1Q8NGS4 319 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 C5orf49A4QMS7 147 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 PRSS56P0CW18 603 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 NKAIN2Q5VXU1 208 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 TBPL2Q6SJ96 375 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 DDOQ99489 341 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 UBQLN3Q9H347 655 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 OCEL1Q9H607 264 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 ZNF716A6NP11 495 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 GPM6AP51674 278 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 TAS2R4Q9NYW5 299 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 ONECUT1Q9UBC0 465 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 ACOT8O14734 319 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 OR5D13Q8NGL4 314 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 COPS9Q8WXC6 57 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 GPR119Q8TDV5 335 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 TNFRSF13CQ96RJ3 184 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 SLC2A9Q9NRM0 540 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 AMMECR1Q9Y4X0 333 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 CCL11P51671 97 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 CTSCP53634 463 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 PELI1Q96FA3 418 aa12.01□□□□□ -0.49
SYNGAP1-208ENST00000629380 GAREM1Q9H706 876 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms