RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 KCNJ8Q15842 424 aa15.75■□□□□ 0.11
SMN2-215ENST00000628696 RFX4Q33E94 735 aa15.75■□□□□ 0.11
SMN2-215ENST00000628696 FAM71F1Q96KD3 344 aaPredicted RBP15.75■□□□□ 0.11
SMN2-215ENST00000628696 IFT27Q9BW83 186 aa15.75■□□□□ 0.11
SMN2-215ENST00000628696 NSRP1Q9H0G5 558 aaKnown RBP15.75■□□□□ 0.11
SMN2-215ENST00000628696 FN3KQ9H479 309 aa15.75■□□□□ 0.11
SMN2-215ENST00000628696 CTSZQ9UBR2 303 aa15.75■□□□□ 0.11
SMN2-215ENST00000628696 CLPSL1A2RUU4 121 aa15.74■□□□□ 0.11
SMN2-215ENST00000628696 LGALS8O00214 317 aa15.74■□□□□ 0.11
SMN2-215ENST00000628696 ADAM20O43506 726 aa15.74■□□□□ 0.11
SMN2-215ENST00000628696 NOS3P29474 1203 aa15.74■□□□□ 0.11
SMN2-215ENST00000628696 GGT2P36268 569 aa15.74■□□□□ 0.11
SMN2-215ENST00000628696 NUDT2P50583 147 aa15.74■□□□□ 0.11
SMN2-215ENST00000628696 TBX15Q96SF7 602 aa15.74■□□□□ 0.11
SMN2-215ENST00000628696 RASSF4Q9H2L5 321 aa15.74■□□□□ 0.11
SMN2-215ENST00000628696 OR52D1Q9H346 318 aa15.74■□□□□ 0.11
SMN2-215ENST00000628696 CYB5R1Q9UHQ9 305 aa15.74■□□□□ 0.11
SMN2-215ENST00000628696 NOP16Q9Y3C1 178 aaKnown RBP15.74■□□□□ 0.11
SMN2-215ENST00000628696 CENPVL3A0A0U1RRI6 287 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 GGT3PA6NGU5 568 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 CD300LBA8K4G0 201 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 NDUFAB1O14561 156 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 TNFRSF13BO14836 293 aaPredicted RBP15.73■□□□□ 0.11
SMN2-215ENST00000628696 SASH3O75995 380 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 NDUFA7O95182 113 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 LIPFP07098 398 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 METTL11BQ5VVY1 283 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 GLYATQ6IB77 296 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 ZNF620Q6ZNG0 422 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 TMEM86BQ8N661 226 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 PNLDC1Q8NA58 520 aaKnown RBP15.73■□□□□ 0.11
SMN2-215ENST00000628696 GATAD2BQ8WXI9 593 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 C7orf34Q96L11 122 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 WDFY2Q96P53 400 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 ADAT1Q9BUB4 502 aaKnown RBP15.73■□□□□ 0.11
SMN2-215ENST00000628696 SLC22A4Q9H015 551 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 PNRC2Q9NPJ4 139 aaKnown RBP15.73■□□□□ 0.11
SMN2-215ENST00000628696 ACOXLQ9NUZ1 547 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 V9GYQ6 96 aa15.73■□□□□ 0.11
SMN2-215ENST00000628696 OR6C68A6NDL8 312 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 M0QZ24 198 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 M0R135 149 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 ARPC3O15145 178 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 GMNNO75496 209 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 GRPP07492 148 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 ZNF823P16415 610 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 C8orf82Q6P1X6 216 aaPredicted RBP15.72■□□□□ 0.11
SMN2-215ENST00000628696 ZBTB46Q86UZ6 589 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 FAM86B1Q8N7N1 296 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 SDR9C7Q8NEX9 313 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 OR2AE1Q8NHA4 323 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 TBC1D15Q8TC07 691 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 SSMEM1Q8WWF3 244 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 LHX4Q969G2 390 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 SPTSSAQ969W0 71 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 ZNF799Q96GE5 643 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 CITED1Q99966 193 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 FUZQ9BT04 418 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 C1orf123Q9NWV4 160 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 SAMD4AQ9UPU9 718 aaKnown RBP15.72■□□□□ 0.11
SMN2-215ENST00000628696 N6AMT1Q9Y5N5 214 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 POMT1Q9Y6A1 747 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 VWFP04275 2813 aa15.72■□□□□ 0.11
SMN2-215ENST00000628696 TRAV38-1A0A0B4J264 116 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 A6NLC8 198 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 CCDC22O60826 627 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 GADD45GO95257 159 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 GYPAP02724 150 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 MMP9P14780 707 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 H2AFXP16104 143 aaPredicted RBP15.71■□□□□ 0.11
SMN2-215ENST00000628696 SMIM11AP58511 58 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 PSME3P61289 254 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 ARF6P62330 175 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 SPIBQ01892 262 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 ZNF92Q03936 586 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 POU4F2Q12837 409 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 OCLNQ16625 522 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 SNAI3Q3KNW1 292 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 SLC35F1Q5T1Q4 408 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 HACD2Q6Y1H2 254 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 ZNF826PQ6ZT77 177 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 PDZD9Q8IXQ8 264 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 LNX2Q8N448 690 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 SCCPDHQ8NBX0 429 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 MAP6Q96JE9 813 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 DHRS1Q96LJ7 313 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 TRIM15Q9C019 465 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 SMURF1Q9HCE7 757 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 DCAF13Q9NV06 445 aaKnown RBP15.71■□□□□ 0.11
SMN2-215ENST00000628696 MRPL22Q9NWU5 206 aaKnown RBP15.71■□□□□ 0.11
SMN2-215ENST00000628696 RNF114Q9Y508 228 aa15.71■□□□□ 0.11
SMN2-215ENST00000628696 NOTCH1P46531 2555 aa15.7■□□□□ 0.1
SMN2-215ENST00000628696 IGHV1-69DA0A0B4J2H0 117 aa15.7■□□□□ 0.1
SMN2-215ENST00000628696 hCG_1807616A0A1W2PRN6 198 aa15.7■□□□□ 0.1
SMN2-215ENST00000628696 OOEPA6NGQ2 149 aa15.7■□□□□ 0.1
SMN2-215ENST00000628696 TIMM23O14925 209 aa15.7■□□□□ 0.1
SMN2-215ENST00000628696 NDUFA2O43678 99 aa15.7■□□□□ 0.1
SMN2-215ENST00000628696 OR10H3O60404 316 aa15.7■□□□□ 0.1
SMN2-215ENST00000628696 GMDSO60547 372 aa15.7■□□□□ 0.1
SMN2-215ENST00000628696 IGHV1-69P01742 117 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms