RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 ZNF547Q8IVP9 402 aa1.56□□□□□ -2.16
VBP1-204ENST00000625964 CDKL3Q8IVW4 592 aaPredicted RBP1.56□□□□□ -2.16
VBP1-204ENST00000625964 OR8J1Q8NGP2 316 aa1.56□□□□□ -2.16
VBP1-204ENST00000625964 SLC25A46Q96AG3 418 aa1.56□□□□□ -2.16
VBP1-204ENST00000625964 PKNOX2Q96KN3 472 aa1.56□□□□□ -2.16
VBP1-204ENST00000625964 OR52D1Q9H346 318 aa1.56□□□□□ -2.16
VBP1-204ENST00000625964 SLC38A10Q9HBR0 1119 aa1.56□□□□□ -2.16
VBP1-204ENST00000625964 SUN2Q9UH99 717 aa1.56□□□□□ -2.16
VBP1-204ENST00000625964 ENOPH1Q9UHY7 261 aa1.56□□□□□ -2.16
VBP1-204ENST00000625964 TSSC4Q9Y5U2 329 aaPredicted RBP1.56□□□□□ -2.16
VBP1-204ENST00000625964 LAMA3Q16787 3333 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 MRC1P22897 1456 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 MAPK8IP3Q9UPT6 1336 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 NRXN2Q9P2S2 1712 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 RTL1A6NKG5 1358 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 SCN11AQ9UI33 1791 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 ZNF609O15014 1411 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 ZFHX2Q9C0A1 2572 aaPredicted RBP1.55□□□□□ -2.16
VBP1-204ENST00000625964 FLNBO75369 2602 aaKnown RBP1.55□□□□□ -2.16
VBP1-204ENST00000625964 GLYATL1P3A0A0U1RQE8 302 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 ZNF716A6NP11 495 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 CCL5P13501 91 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 ZNF250P15622 560 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 IL1RNP18510 177 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 RPS12P25398 132 aaKnown RBP1.55□□□□□ -2.16
VBP1-204ENST00000625964 PRPHP41219 470 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 HNMTP50135 292 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 SLC25A11Q02978 314 aaKnown RBP1.55□□□□□ -2.16
VBP1-204ENST00000625964 CHIT1Q13231 466 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 SLC16A13Q7RTY0 426 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 NBPF5PQ86XG9 351 aaPredicted RBP1.55□□□□□ -2.16
VBP1-204ENST00000625964 ZFP41Q8N8Y5 198 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 ZNF502Q8TBZ5 544 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 SLC7A13Q8TCU3 470 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 UBE2Q2Q8WVN8 375 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 SHC3Q92529 594 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 PTX4Q96A99 478 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 TRIM44Q96DX7 344 aaPredicted RBP1.55□□□□□ -2.16
VBP1-204ENST00000625964 GALNT14Q96FL9 552 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 TEKT3Q9BXF9 490 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 C1orf198Q9H425 327 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 NUP50Q9UKX7 468 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 COL4A5P29400 1685 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 FAM208AQ9UK61 1670 aaKnown RBP1.55□□□□□ -2.16
VBP1-204ENST00000625964 LAMA2P24043 3122 aaKnown RBP1.55□□□□□ -2.16
VBP1-204ENST00000625964 HTTP42858 3142 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 CHD6Q8TD26 2715 aa1.55□□□□□ -2.16
VBP1-204ENST00000625964 DLEC1Q9Y238 1755 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 A0A1W2PP64 1363 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 RAB3GAP2Q9H2M9 1393 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 ITGB4P16144 1822 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 AFDNP55196 1824 aaKnown RBP1.54□□□□□ -2.16
VBP1-204ENST00000625964 RIF1Q5UIP0 2472 aaKnown RBP1.54□□□□□ -2.16
VBP1-204ENST00000625964 ARHGEF35A5YM69 484 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 OR6C74A6NCV1 312 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 H0YJW9 148 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 L7N2F9 121 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 MRPS12O15235 138 aaKnown RBP1.54□□□□□ -2.16
VBP1-204ENST00000625964 SOCS1O15524 211 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 SURF6O75683 361 aaKnown RBP1.54□□□□□ -2.16
VBP1-204ENST00000625964 HLA-DQB1P01920 261 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 CD3GP09693 182 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 OR8U9P0C7N5 309 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 ZNF688P0C7X2 276 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 MCF2P10911 925 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 MX1P20591 662 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 CRYBB2P43320 205 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 CCNHP51946 323 aaPredicted RBP1.54□□□□□ -2.16
VBP1-204ENST00000625964 RND2P52198 227 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 PLP1P60201 277 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 RCAN2Q14206 197 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 OR2L3Q8NG85 312 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 OR6N1Q8NGY5 312 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 OR5B3Q8NH48 314 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 C17orf50Q8WW18 174 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 KCNE3Q9Y6H6 103 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 ACACBO00763 2458 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 LAMB4A4D0S4 1761 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 NCOR2Q9Y618 2525 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 PRUNE2Q8WUY3 3088 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 KIF24Q5T7B8 1368 aa1.54□□□□□ -2.16
VBP1-204ENST00000625964 ZNF831Q5JPB2 1677 aa1.53□□□□□ -2.16
VBP1-204ENST00000625964 EDC4Q6P2E9 1401 aaKnown RBP1.53□□□□□ -2.16
VBP1-204ENST00000625964 MON2Q7Z3U7 1717 aa1.53□□□□□ -2.16
VBP1-204ENST00000625964 CENPVL3A0A0U1RRI6 287 aa1.53□□□□□ -2.16
VBP1-204ENST00000625964 C5orf63A6NC05 138 aa1.53□□□□□ -2.16
VBP1-204ENST00000625964 POLR1CO15160 346 aaPredicted RBP1.53□□□□□ -2.16
VBP1-204ENST00000625964 CHST10O43529 356 aa1.53□□□□□ -2.16
VBP1-204ENST00000625964 RDH16O75452 317 aa1.53□□□□□ -2.16
VBP1-204ENST00000625964 CLPXO76031 633 aa1.53□□□□□ -2.16
VBP1-204ENST00000625964 HNRNPH3P31942 346 aaKnown RBP1.53□□□□□ -2.16
VBP1-204ENST00000625964 HCAR3P49019 387 aa1.53□□□□□ -2.16
VBP1-204ENST00000625964 CDKN2DP55273 166 aa1.53□□□□□ -2.16
VBP1-204ENST00000625964 VSX2P58304 361 aaPredicted RBP1.53□□□□□ -2.16
VBP1-204ENST00000625964 KRTAP12-3P60328 96 aa1.53□□□□□ -2.16
VBP1-204ENST00000625964 MPV17L2Q567V2 206 aa1.53□□□□□ -2.16
VBP1-204ENST00000625964 KDELC1Q6UW63 502 aa1.53□□□□□ -2.16
VBP1-204ENST00000625964 NIPA1Q7RTP0 329 aa1.53□□□□□ -2.16
VBP1-204ENST00000625964 PPP1R42Q7Z4L9 355 aa1.53□□□□□ -2.16
VBP1-204ENST00000625964 TMEM256Q8N2U0 113 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms