RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 PHB2Q99623 299 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 MICU1Q9BPX6 476 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 NAA11Q9BSU3 229 aaPredicted RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 RSRP1Q9BUV0 290 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 NUDT9Q9BW91 350 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 VSIG4Q9Y279 399 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 ASPMQ8IZT6 3477 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 IGLV1-36A0A0B4J1U3 117 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 B4DGG1 531 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 EIF1AYO14602 144 aaKnown RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 MT-ND4LP03901 98 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 CD79AP11912 226 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 GP1BBP13224 206 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 HLA-GP17693 338 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 CPT2P23786 658 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 ZBTB25P24278 435 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 IL12BP29460 328 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 EIF1AXP47813 144 aaKnown RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 PPM1FP49593 454 aaPredicted RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 GLO1Q04760 184 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 PJVKQ0ZLH3 352 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 TOMM34Q15785 309 aaPredicted RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 DMRTC2Q8IXT2 367 aaPredicted RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 TDHQ8IZJ6 230 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 OR52N5Q8NH56 324 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 RNASE11Q8TAA1 199 aaKnown RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 ZNF519Q8TB69 540 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 PTPMT1Q8WUK0 201 aaPredicted RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 RNF141Q8WVD5 230 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 PTX4Q96A99 478 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 NRIP2Q9BQI9 281 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 TOLLIPQ9H0E2 274 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 TXNIPQ9H3M7 391 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 SLC2A8Q9NY64 477 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 VSX1Q9NZR4 365 aaPredicted RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 RCC2Q9P258 522 aaKnown RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 EMC9Q9Y3B6 208 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 FAM96BQ9Y3D0 163 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 EML5Q05BV3 1969 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 CACNA1HO95180 2353 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 FRG2CA6NGY1 282 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 AP4M1O00189 453 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 TERTO14746 1132 aaKnown RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 LDLRAD4O15165 306 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 SLC31A2O15432 143 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 IGHV2-5P01817 119 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 CD37P11049 281 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 PGCP20142 388 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 CRABP1P29762 137 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 CASRP41180 1078 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 F2RL1P55085 397 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 HYAL1Q12794 435 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 PPP1R1AQ13522 171 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 PHF19Q5T6S3 580 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 IL34Q6ZMJ4 242 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 NKAIN3Q8N8D7 197 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 AKR7LQ8NHP1 331 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 FOXRED1Q96CU9 486 aaPredicted RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 CST11Q9H112 138 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 CHMP1AQ9HD42 196 aaPredicted RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 ATXN7L1Q9ULK2 861 aaPredicted RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 TMEM184BQ9Y519 407 aaPredicted RBP7.78□□□□□ -1.16
VCL-207ENST00000624354 R4GMQ9 66 aa7.78□□□□□ -1.16
VCL-207ENST00000624354 GVINP1Q7Z2Y8 2422 aa7.77□□□□□ -1.16
VCL-207ENST00000624354 LOC107986453A0A1B0GWG9 222 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 C9orf170A2RU37 121 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 SLC34A2O95436 690 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 VAMP1P23763 118 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 CTHP32929 405 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 HTR5AP47898 357 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 CSNK1EP49674 416 aaKnown RBP7.77□□□□□ -1.17
VCL-207ENST00000624354 RAB5CP51148 216 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 C1orf100Q5SVJ3 147 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 FJX1Q86VR8 437 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 ZDHHC22Q8N966 263 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 CHST4Q8NCG5 386 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 OR10H5Q8NGA6 315 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 OR10R2Q8NGX6 335 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 FAM174AQ8TBP5 190 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 CASTOR1Q8WTX7 329 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 MITD1Q8WV92 249 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 SSX3Q99909 188 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 RTN4RQ9BZR6 473 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 PPP4R1LQ9P1A2 415 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 MPDZO75970 2070 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 TMEM150CB9EJG8 249 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 PRAMEF26H0Y7S4 382 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 STK17BO94768 372 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 SEMA4FO95754 770 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 TPT1P13693 172 aaKnown RBP7.77□□□□□ -1.17
VCL-207ENST00000624354 ZNF823P16415 610 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 RAB6AP20340 208 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 CD1CP29017 333 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 AVPR2P30518 371 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 TAS2R60P59551 318 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 SQSTM1Q13501 440 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 INPP5JQ15735 1006 aaPredicted RBP7.77□□□□□ -1.17
VCL-207ENST00000624354 TMEM244Q5VVB8 128 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 TRAPPC6BQ86SZ2 158 aa7.77□□□□□ -1.17
VCL-207ENST00000624354 MARCH3Q86UD3 253 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms