RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 LCATP04180 440 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 DUX4L2P0CJ85 424 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 DUX4L3P0CJ86 424 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 DUX4L4P0CJ87 422 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 DUX4L5P0CJ88 424 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 DUX4L6P0CJ89 424 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 DUX4L7P0CJ90 424 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 NCK1P16333 377 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 RPS27P42677 84 aaKnown RBP9.05□□□□□ -0.96
LINC00963-214ENST00000622680 OMPP47874 163 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 NPY4RP50391 375 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 ARF6P62330 175 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 ELF3P78545 371 aaPredicted RBP9.05□□□□□ -0.96
LINC00963-214ENST00000622680 PRB3Q04118 309 aaPredicted RBP9.05□□□□□ -0.96
LINC00963-214ENST00000622680 LIPEQ05469 1076 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 POU4F2Q12837 409 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 TRAP1Q12931 704 aaKnown RBP9.05□□□□□ -0.96
LINC00963-214ENST00000622680 PDCD1Q15116 288 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 MAPRE2Q15555 327 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 HIST2H2BDQ6DRA6 164 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 SLC18B1Q6NT16 456 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 CGB2Q6NT52 195 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 DUX4L9Q6RFH8 374 aaPredicted RBP9.05□□□□□ -0.96
LINC00963-214ENST00000622680 Q6ZSV7 163 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 ZNF826PQ6ZT77 177 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 FKBP9P1Q75LS8 142 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 CBLL1Q75N03 491 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 PGAP1Q75T13 922 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 MRPL21Q7Z2W9 205 aaKnown RBP9.05□□□□□ -0.96
LINC00963-214ENST00000622680 CELF2-AS1Q8N7Q2 184 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 SLC26A10Q8NG04 563 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 OR2AE1Q8NHA4 323 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 FAM110DQ8TAY7 271 aaPredicted RBP9.05□□□□□ -0.96
LINC00963-214ENST00000622680 FANK1Q8TC84 345 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 SPRYD4Q8WW59 207 aaPredicted RBP9.05□□□□□ -0.96
LINC00963-214ENST00000622680 PITX2Q99697 317 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 ATF6BQ99941 703 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 FN3KRPQ9HA64 309 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 TCF7L1Q9HCS4 588 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 SRA1Q9HD15 236 aaKnown RBP9.05□□□□□ -0.96
LINC00963-214ENST00000622680 PNRC2Q9NPJ4 139 aaKnown RBP9.05□□□□□ -0.96
LINC00963-214ENST00000622680 RPRD1BQ9NQG5 326 aaKnown RBP9.05□□□□□ -0.96
LINC00963-214ENST00000622680 GID8Q9NWU2 228 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 ERVK-18Q9QC07 812 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 DUX4Q9UBX2 424 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 ENPP4Q9Y6X5 453 aa9.05□□□□□ -0.96
LINC00963-214ENST00000622680 UNC119BA6NIH7 251 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 GSTA4O15217 222 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 TXNDC12O95881 172 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 H1F0P07305 194 aaKnown RBP9.04□□□□□ -0.96
LINC00963-214ENST00000622680 PSKH1P11801 424 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 CRABP1P29762 137 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 MDH1P40925 334 aaKnown RBP9.04□□□□□ -0.96
LINC00963-214ENST00000622680 IER3P46695 156 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 RPS6KA3P51812 740 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 DLX1P56177 255 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 RPL15P61313 204 aaKnown RBP9.04□□□□□ -0.96
LINC00963-214ENST00000622680 SNAI3Q3KNW1 292 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 CD276Q5ZPR3 534 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 PGM2L1Q6PCE3 622 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 DNM1P34Q6PK57 102 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 BTN2A1Q7KYR7 527 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 VMO1Q7Z5L0 202 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 CYP4Z1Q86W10 505 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 LDLRAD3Q86YD5 345 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 FAM90A1Q86YD7 464 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 SLC15A3Q8IY34 581 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 OR6V1Q8N148 313 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 LNX2Q8N448 690 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 PIP4P2Q8N4L2 257 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 PNLDC1Q8NA58 520 aaKnown RBP9.04□□□□□ -0.96
LINC00963-214ENST00000622680 TBC1D15Q8TC07 691 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 ST8SIA4Q92187 359 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 ERGIC1Q969X5 290 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 ERMAPQ96PL5 475 aaPredicted RBP9.04□□□□□ -0.96
LINC00963-214ENST00000622680 NMNAT3Q96T66 252 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 TRIM15Q9C019 465 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 FAM107BQ9H098 131 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 ANKRD19PQ9H560 264 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 FGFR1OP2Q9NVK5 253 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 C1orf123Q9NWV4 160 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 B9D1Q9UPM9 204 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 AURKCQ9UQB9 309 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 CAPN7Q9Y6W3 813 aa9.04□□□□□ -0.96
LINC00963-214ENST00000622680 KMT2CQ8NEZ4 4911 aaKnown RBP9.04□□□□□ -0.96
LINC00963-214ENST00000622680 hCG_1807616A0A1W2PRN6 198 aa9.03□□□□□ -0.96
LINC00963-214ENST00000622680 OOEPA6NGQ2 149 aa9.03□□□□□ -0.96
LINC00963-214ENST00000622680 A6NLC8 198 aa9.03□□□□□ -0.96
LINC00963-214ENST00000622680 CD300LBA8K4G0 201 aa9.03□□□□□ -0.96
LINC00963-214ENST00000622680 M0R135 149 aa9.03□□□□□ -0.96
LINC00963-214ENST00000622680 DVL1O14640 695 aa9.03□□□□□ -0.96
LINC00963-214ENST00000622680 TROVE2P10155 538 aaKnown RBP eCLIP9.03□□□□□ -0.96
LINC00963-214ENST00000622680 GSK3BP49841 420 aa9.03□□□□□ -0.96
LINC00963-214ENST00000622680 SLC7A2P52569 658 aa9.03□□□□□ -0.96
LINC00963-214ENST00000622680 ZNF92Q03936 586 aa9.03□□□□□ -0.96
LINC00963-214ENST00000622680 MALLQ13021 153 aa9.03□□□□□ -0.96
LINC00963-214ENST00000622680 DHRS7BQ6IAN0 325 aaPredicted RBP9.03□□□□□ -0.96
LINC00963-214ENST00000622680 SMARCD3Q6STE5 483 aa9.03□□□□□ -0.96
LINC00963-214ENST00000622680 DPY19L2P2Q6ZN68 376 aa9.03□□□□□ -0.96
LINC00963-214ENST00000622680 GCSAMQ8N6F7 178 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms