RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 TMEM159Q96B96 161 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 ARSGQ96EG1 525 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 GUCD1Q96NT3 240 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 AQP10Q96PS8 301 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 CNN2Q99439 309 aaKnown RBP7.12□□□□□ -1.27
VPS11-209ENST00000622309 SEPT5Q99719 369 aaPredicted RBP7.12□□□□□ -1.27
VPS11-209ENST00000622309 PNO1Q9NRX1 252 aaKnown RBP7.12□□□□□ -1.27
VPS11-209ENST00000622309 LRFN1Q9P244 771 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 ZNF281Q9Y2X9 895 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 DYRK1BQ9Y463 629 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 H0YIZ8 118 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 H3BQ15 152 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 BNIP3LO60238 219 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 CTAG2O75638 210 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 PET100P0DJ07 73 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 ZNF28P17035 718 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 PRSS53Q2L4Q9 553 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 C1orf194Q5T5A4 169 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 LMNTD1Q8N9Z9 388 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 OR5T1Q8NG75 326 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 MRGPRDQ8TDS7 321 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 SEH1LQ96EE3 360 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 SLC5A7Q9GZV3 580 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 HIF1ANQ9NWT6 349 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 AHSPQ9NZD4 102 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 TAAR2Q9P1P5 351 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 CYP8B1Q9UNU6 501 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 VSIG4Q9Y279 399 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 WDR45Q9Y484 360 aa7.12□□□□□ -1.27
VPS11-209ENST00000622309 PDCD11Q14690 1871 aaKnown RBP7.12□□□□□ -1.27
VPS11-209ENST00000622309 A0A087WWC5 75 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 TRBV11-1A0A0K0K1C0 115 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 TSPAN11A1L157 253 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 UNC119BA6NIH7 251 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 JTBO76095 146 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 PNLIPP16233 465 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 SLC37A1P57057 533 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 S100A10P60903 97 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 DECR1Q16698 335 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 ATP6V1FQ16864 119 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 RNFT1Q5M7Z0 435 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 ZNF627Q7L945 461 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 GRASPQ7Z6J2 395 aaPredicted RBP7.11□□□□□ -1.27
VPS11-209ENST00000622309 GCNT2Q8N0V5 402 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 SYS1Q8N2H4 156 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 TMEM104Q8NE00 496 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 OR13C9Q8NGT0 318 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 OR1P1Q8NH06 330 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 CORO2AQ92828 525 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 SLC35G5Q96KT7 338 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 CD180Q99467 661 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 PRRT1Q99946 306 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 MAGEH1Q9H213 219 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 PDFQ9HBH1 243 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 OR5AC2Q9NZP5 309 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 DKKL1Q9UK85 242 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 CDC40O60508 579 aaKnown RBP eCLIP7.11□□□□□ -1.27
VPS11-209ENST00000622309 OPN1LWP04000 364 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 CSTBP04080 98 aaKnown RBP7.11□□□□□ -1.27
VPS11-209ENST00000622309 IL11P20809 199 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 TEAD1P28347 426 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 PBX2P40425 430 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 NAA10P41227 235 aaPredicted RBP7.11□□□□□ -1.27
VPS11-209ENST00000622309 RAB7AP51149 207 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 KLF3P57682 345 aaPredicted RBP7.11□□□□□ -1.27
VPS11-209ENST00000622309 RAP1BP61224 184 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 LEG1Q6P5S2 330 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 ZNF100Q8IYN0 542 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 ZNF101Q8IZC7 436 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 RFLNBQ8N5W9 214 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 OR51D1Q8NGF3 324 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 MAFAQ8NHW3 353 aaPredicted RBP7.11□□□□□ -1.27
VPS11-209ENST00000622309 LYPD6BQ8NI32 183 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 SNIP1Q8TAD8 396 aaKnown RBP7.11□□□□□ -1.27
VPS11-209ENST00000622309 GPX8Q8TED1 209 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 TMEM18Q96B42 140 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 WFIKKN1Q96NZ8 548 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 GNRHR2Q96P88 292 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 SYT3Q9BQG1 590 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 SGPP1Q9BX95 441 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.11□□□□□ -1.27
VPS11-209ENST00000622309 KLHL28Q9NXS3 571 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 TCFL5Q9UL49 500 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 Q9Y3F1 56 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 IGLV3-10A0A075B6K4 115 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 CDC42EP2O14613 210 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 DUS4LO95620 317 aaKnown RBP7.11□□□□□ -1.27
VPS11-209ENST00000622309 OR5H8P0DN80 308 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 HOXC8P31273 242 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 PRKAG1P54619 331 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 DLK1P80370 383 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 ARL6IP1Q15041 203 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 KIRREL2Q6UWL6 708 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 ST6GALNAC3Q8NDV1 305 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 STXBP6Q8NFX7 210 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 ZNF563Q8TA94 476 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 SLC2A12Q8TD20 617 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 TMEM255BQ8WV15 326 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 SUSD6Q92537 303 aa7.11□□□□□ -1.27
VPS11-209ENST00000622309 ZMYND19Q96E35 227 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms