RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 M1APQ8TC57 530 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 GAL3ST1Q99999 423 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 SEC61A2Q9H9S3 476 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 PROK2Q9HC23 129 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 ZNF319Q9P2F9 582 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 TRAV14DV4A0A0A6YYC5 116 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 RFPL4AA6NLU0 287 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 RFPL4AL1F8VTS6 287 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 SULT2B1O00204 365 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 RER1O15258 196 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 IL2RAP01589 272 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 OPN1LWP04000 364 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 NR2C1P13056 603 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 PPP3CBP16298 524 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 ZNF20P17024 532 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 KLK2P20151 261 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 CASRP41180 1078 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 GRB2P62993 217 aaKnown RBP8.33□□□□□ -1.08
PDPN-212ENST00000621990 ZFP36L1Q07352 338 aaKnown RBP8.33□□□□□ -1.08
PDPN-212ENST00000621990 AANATQ16613 207 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 CDNFQ49AH0 187 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 FAHD2BQ6P2I3 314 aaPredicted RBP8.33□□□□□ -1.08
PDPN-212ENST00000621990 TMEM65Q6PI78 240 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 OPN5Q6U736 354 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 CHMP1BQ7LBR1 199 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 OR4S1Q8NGB4 309 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 OR5M8Q8NGP6 311 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 OR10R2Q8NGX6 335 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 TMEM54Q969K7 222 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 CMBLQ96DG6 245 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 FAHD2AQ96GK7 314 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 GAREM1Q9H706 876 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 GPR84Q9NQS5 396 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 KCNN3Q9UGI6 736 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 VSIG4Q9Y279 399 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 POLR1DQ9Y2S0 133 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 TEX51A0A1B0GUA7 166 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 SSX5O60225 188 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 RP2O75695 350 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 CHRM2P08172 466 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 LIFP15018 202 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 NAT1P18440 290 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 ANOS1P23352 680 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 ZBTB25P24278 435 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 SFTPDP35247 375 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 CX3CR1P49238 355 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 NUBP1P53384 320 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 RNASE10Q5GAN6 216 aaKnown RBP8.33□□□□□ -1.08
PDPN-212ENST00000621990 PRAMEF20Q5VT98 475 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 Q6ZSR3 168 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 DOK3Q7L591 496 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 ABHD12BQ7Z5M8 362 aaPredicted RBP8.33□□□□□ -1.08
PDPN-212ENST00000621990 ANGPTL5Q86XS5 388 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 OR6K3Q8NGY3 331 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 PAQR8Q8TEZ7 354 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 LPAR5Q9H1C0 372 aa8.33□□□□□ -1.08
PDPN-212ENST00000621990 RYDENQ9NUL5 291 aaKnown RBP8.33□□□□□ -1.08
PDPN-212ENST00000621990 ZNF726A6NNF4 738 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 TLX3O43711 291 aaPredicted RBP8.32□□□□□ -1.08
PDPN-212ENST00000621990 GDF9O60383 454 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 CELA2AP08217 269 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 M6PRP20645 277 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 HIST1H3AP68431 136 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 FAM209AQ5JX71 171 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 SFRP5Q5T4F7 317 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 HIST2H3PS2Q5TEC6 136 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 CARD17Q5XLA6 110 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 AWAT2Q6E213 333 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 HIST2H3AQ71DI3 136 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 TMED4Q7Z7H5 227 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 SCARB1Q8WTV0 552 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 GPN3Q9UHW5 284 aaPredicted RBP8.32□□□□□ -1.08
PDPN-212ENST00000621990 FARSAQ9Y285 508 aaKnown RBP8.32□□□□□ -1.08
PDPN-212ENST00000621990 KCNK7Q9Y2U2 307 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 HS3ST3B1Q9Y662 390 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 KIAA1549Q9HCM3 1950 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 FXYD6-FXYD2A0A087WZ82 144 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 A0A0A6YYD4 124 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 ZIC3O60481 467 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 EIF1BO60739 113 aaKnown RBP8.32□□□□□ -1.08
PDPN-212ENST00000621990 VAMP5O95183 116 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 NMBP08949 121 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 CD63P08962 238 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 GSTP1P09211 210 aaKnown RBP8.32□□□□□ -1.08
PDPN-212ENST00000621990 ABOP16442 354 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 GNB3P16520 340 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 MPGP29372 298 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 ALDH3B1P43353 468 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 DSCR4P56555 118 aaPredicted RBP8.32□□□□□ -1.08
PDPN-212ENST00000621990 CXADRP78310 365 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 MC2RQ01718 297 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 FGL1Q08830 312 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 GK2Q14410 553 aaPredicted RBP8.32□□□□□ -1.08
PDPN-212ENST00000621990 TAF13Q15543 124 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 C11orf88Q6PI97 169 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 GSG1LQ6UXU4 331 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 RNF144BQ7Z419 303 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 TMEM123Q8N131 208 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 GVQW1Q8N7I0 195 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 AGBL5Q8NDL9 886 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms