RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 RGS6P49758 472 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 GYS2P54840 703 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 ELF3P78545 371 aaPredicted RBP9.53□□□□□ -0.88
CPNE3-210ENST00000621245 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.53□□□□□ -0.88
CPNE3-210ENST00000621245 BAMBIQ13145 260 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 SLC9A3R2Q15599 337 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 RUSC1-AS1Q66K80 236 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 SLC27A4Q6P1M0 643 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 DNM1P34Q6PK57 102 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 BRD3OSQ6XYD6 125 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 ZNF841Q6ZN19 808 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 C8orf86Q6ZUL3 223 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 OR52E2Q8NGJ4 325 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 OR9Q1Q8NGQ5 310 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 OR13G1Q8NGZ3 307 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 SLCO4A1Q96BD0 722 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 CMTM5Q96DZ9 223 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 DDOQ99489 341 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 PITX2Q99697 317 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 ATF6BQ99941 703 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 BTBD10Q9BSF8 475 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 MRI1Q9BV20 369 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 TUBG2Q9NRH3 451 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 TMCC3Q9ULS5 477 aa9.53□□□□□ -0.88
CPNE3-210ENST00000621245 WNK1Q9H4A3 2382 aa9.52□□□□□ -0.88
CPNE3-210ENST00000621245 BHLHE40O14503 412 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 ARPC3O15145 178 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 SNX3O60493 162 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 PLATP00750 562 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 RENP00797 406 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 LCATP04180 440 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 SFTPBP07988 381 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 RNASE1P07998 156 aaKnown RBP9.52□□□□□ -0.89
CPNE3-210ENST00000621245 CLUP10909 449 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 SLC2A1P11166 492 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 HSD17B1P14061 328 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 CA6P23280 308 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 PRDX6P30041 224 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 PITPNBP48739 271 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 SRP9P49458 86 aaKnown RBP9.52□□□□□ -0.89
CPNE3-210ENST00000621245 GNB2P62879 340 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 ZNF92Q03936 586 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 SRSF4Q08170 494 aaKnown RBP9.52□□□□□ -0.89
CPNE3-210ENST00000621245 KRT72Q14CN4 511 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 GLYATL3Q5SZD4 288 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 ZNF362Q5T0B9 420 aaPredicted RBP9.52□□□□□ -0.89
CPNE3-210ENST00000621245 MUC20Q8N307 709 aaPredicted RBP9.52□□□□□ -0.89
CPNE3-210ENST00000621245 FGFRL1Q8N441 504 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 FITM2Q8N6M3 262 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 OR5L1Q8NGL2 311 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 OR4Q3Q8NH05 313 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 UPRTQ96BW1 309 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 NEIL1Q96FI4 390 aaPredicted RBP9.52□□□□□ -0.89
CPNE3-210ENST00000621245 WDR89Q96FK6 387 aaPredicted RBP9.52□□□□□ -0.89
CPNE3-210ENST00000621245 COG8Q96MW5 612 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 ZNF747Q9BV97 191 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 PPP1R3EQ9H7J1 279 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 NTN4Q9HB63 628 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 SMURF1Q9HCE7 757 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 TMEM100Q9NV29 134 aa9.52□□□□□ -0.89
CPNE3-210ENST00000621245 A0A1B0GW55 424 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 M0R135 149 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 NDUFAB1O14561 156 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 HLA-DQA2P01906 255 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 FABP3P05413 133 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 GYPBP06028 91 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 DUX4L2P0CJ85 424 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 DUX4L3P0CJ86 424 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 DUX4L4P0CJ87 422 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 DUX4L5P0CJ88 424 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 DUX4L6P0CJ89 424 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 DUX4L7P0CJ90 424 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 MDKP21741 143 aaPredicted RBP9.51□□□□□ -0.89
CPNE3-210ENST00000621245 OMGP23515 440 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 CD200P41217 278 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 GATA4P43694 442 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 FGF12P61328 243 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 TSPAN31Q12999 210 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 ZNF181Q2M3W8 571 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 DEFB112Q30KQ8 113 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 WDR25Q64LD2 544 aaPredicted RBP9.51□□□□□ -0.89
CPNE3-210ENST00000621245 SFRP4Q6FHJ7 346 aaPredicted RBP9.51□□□□□ -0.89
CPNE3-210ENST00000621245 ZNF770Q6IQ21 691 aaPredicted RBP9.51□□□□□ -0.89
CPNE3-210ENST00000621245 PGM2L1Q6PCE3 622 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 DUX4L9Q6RFH8 374 aaPredicted RBP9.51□□□□□ -0.89
CPNE3-210ENST00000621245 CYP2R1Q6VVX0 501 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 ZNF826PQ6ZT77 177 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 C9orf139Q6ZV77 190 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 WDR86Q86TI4 376 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 ZDHHC21Q8IVQ6 265 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 BOLLQ8N9W6 283 aaKnown RBP9.51□□□□□ -0.89
CPNE3-210ENST00000621245 SLC37A3Q8NCC5 494 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 OR4C15Q8NGM1 316 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 RAB40AQ8WXH6 277 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 ZMYND19Q96E35 227 aaPredicted RBP9.51□□□□□ -0.89
CPNE3-210ENST00000621245 ZNF799Q96GE5 643 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 NSMCE2Q96MF7 247 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 CDRT15Q96T59 188 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 NUDT16L1Q9BRJ7 211 aaKnown RBP9.51□□□□□ -0.89
CPNE3-210ENST00000621245 ADAT1Q9BUB4 502 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms