RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 DUSP13Q9UII6 198 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 LAMP3Q9UQV4 416 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 CYSRT1A8MQ03 144 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 ZNF254O75437 659 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 SULT1C4O75897 302 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 GOSR1O95249 250 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 KIR3DL2P43630 455 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 PSG7Q13046 419 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 MRPL24Q96A35 216 aaKnown RBP11.69□□□□□ -0.54
NEK3-210ENST00000620675 SGK3Q96BR1 496 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 PGAM5Q96HS1 289 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 PBOV1Q9GZY1 135 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 ZNF442Q9H7R0 627 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 SCN3BQ9NY72 215 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 SIRT4Q9Y6E7 314 aaPredicted RBP11.69□□□□□ -0.54
NEK3-210ENST00000620675 R4GMQ9 66 aa11.69□□□□□ -0.54
NEK3-210ENST00000620675 PRRC2AP48634 2157 aaKnown RBP11.68□□□□□ -0.54
NEK3-210ENST00000620675 TTRP02766 147 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 ZNF250P15622 560 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 APOBEC3AP31941 199 aaPredicted RBP11.68□□□□□ -0.54
NEK3-210ENST00000620675 SERPINF1P36955 418 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 MAP2K4P45985 399 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 TNK1Q13470 666 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 WDR38Q5JTN6 314 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 RBM48Q5RL73 367 aaKnown RBP11.68□□□□□ -0.54
NEK3-210ENST00000620675 OR2T2Q6IF00 324 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 RDH10Q8IZV5 341 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 MUC15Q8N387 334 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 ZNF611Q8N823 705 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 GATAD2BQ8WXI9 593 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 CMBLQ96DG6 245 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 INPP5EQ9NRR6 644 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 EXOSC1Q9Y3B2 195 aaKnown RBP11.68□□□□□ -0.54
NEK3-210ENST00000620675 TPRKBQ9Y3C4 175 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 CMAHPQ9Y471 501 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 SPEF1Q9Y4P9 236 aa11.68□□□□□ -0.54
NEK3-210ENST00000620675 LOC110117498-PIK3R3F6TDL0 507 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 ALDH3B1P43353 468 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 RGS6P49758 472 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 MMP16P51512 607 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 CSNK2BP67870 215 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 HNRNPA0Q13151 305 aaKnown RBP11.67□□□□□ -0.54
NEK3-210ENST00000620675 IRF3Q14653 427 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 ARL9Q6T311 187 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 CATSPERDQ86XM0 798 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 OR5AS1Q8N127 324 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 ZFP41Q8N8Y5 198 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 BHLHE23Q8NDY6 225 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 OR5M11Q96RB7 305 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 CCDC90BQ9GZT6 254 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 PPP1R3EQ9H7J1 279 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 NIPAL2Q9H841 368 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 FRRS1LQ9P0K9 344 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 OR52A1Q9UKL2 312 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 PLEKHA6Q9Y2H5 1048 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 ZANQ9Y493 2812 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 MYL12AP19105 171 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 EEF1B2P24534 225 aaKnown RBP11.67□□□□□ -0.54
NEK3-210ENST00000620675 DCTDP32321 178 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 RBMXP38159 391 aaKnown RBP11.67□□□□□ -0.54
NEK3-210ENST00000620675 ACTA2P62736 377 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 ACTG2P63267 376 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 SWI5Q1ZZU3 235 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 C11orf71Q6IPW1 123 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 KLBQ86Z14 1044 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 OR2G2Q8NGZ5 317 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 SYNPRQ8TBG9 265 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 OR51E1Q8TCB6 317 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 IGFBPL1Q8WX77 278 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 PLK3Q9H4B4 646 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 NUFIP1Q9UHK0 495 aaKnown RBP11.67□□□□□ -0.54
NEK3-210ENST00000620675 CAB39Q9Y376 341 aaPredicted RBP11.67□□□□□ -0.54
NEK3-210ENST00000620675 ITPR3Q14573 2671 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 MED13LQ71F56 2210 aa11.67□□□□□ -0.54
NEK3-210ENST00000620675 IGLV3-9A0A075B6K5 115 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 IRGMA1A4Y4 181 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 RGS10O43665 173 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 ATE1O95260 518 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 CDKN1AP38936 164 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 ZNF829Q3KNS6 432 aaPredicted RBP11.66□□□□□ -0.54
NEK3-210ENST00000620675 ZNF718Q3SXZ3 478 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 MBNL2Q5VZF2 373 aaKnown RBP11.66□□□□□ -0.54
NEK3-210ENST00000620675 ZNF544Q6NX49 715 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 FBXW12Q6X9E4 464 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 FAM220AQ7Z4H9 259 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 SYS1Q8N2H4 156 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 KLHL36Q8N4N3 616 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 NANOGP1Q8N7R0 232 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 OR10AC1Q8NH08 325 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 MYDGFQ969H8 173 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 REEP6Q96HR9 211 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 TRAF4Q9BUZ4 470 aaPredicted RBP11.66□□□□□ -0.54
NEK3-210ENST00000620675 REPIN1Q9BWE0 567 aaKnown RBP11.66□□□□□ -0.54
NEK3-210ENST00000620675 CDCA4Q9BXL8 241 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 LSM2Q9Y333 95 aaKnown RBP11.66□□□□□ -0.54
NEK3-210ENST00000620675 OTOGQ6ZRI0 2925 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 A0A1B0GTI1 187 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 PNMA8CA0A1B0GUJ8 204 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 P2RY10O00398 339 aa11.66□□□□□ -0.54
NEK3-210ENST00000620675 LMX1BO60663 402 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 223 ms