RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 CDH10Q9Y6N8 788 aa13.41□□□□□ -0.26
LINC00221-202ENST00000619530 A3GALT2U3KPV4 340 aa13.41□□□□□ -0.26
LINC00221-202ENST00000619530 ANK3Q12955 4377 aaKnown RBP13.4□□□□□ -0.26
LINC00221-202ENST00000619530 PRODHO43272 600 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 PFDN1O60925 122 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 MPZL1O95297 269 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 PPP1R3DO95685 299 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 ZNF250P15622 560 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 CTLA4P16410 223 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 SDHAP31040 664 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 MAGEB1P43366 347 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 ZNF404Q494X3 552 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 GPR139Q6DWJ6 353 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 SMARCD3Q6STE5 483 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.4□□□□□ -0.26
LINC00221-202ENST00000619530 NANOGP1Q8N7R0 232 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 OR52I1Q8NGK6 324 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 OR9Q1Q8NGQ5 310 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 ABHD4Q8TB40 342 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 FANK1Q8TC84 345 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 SNX33Q8WV41 574 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 GTF3AQ92664 365 aaKnown RBP13.4□□□□□ -0.26
LINC00221-202ENST00000619530 MSI2Q96DH6 328 aaKnown RBP13.4□□□□□ -0.26
LINC00221-202ENST00000619530 ERMAPQ96PL5 475 aaPredicted RBP13.4□□□□□ -0.26
LINC00221-202ENST00000619530 CHODLQ9H9P2 273 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 NRIP3Q9NQ35 241 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 SLCO1C1Q9NYB5 712 aa13.4□□□□□ -0.26
LINC00221-202ENST00000619530 COA3Q9Y2R0 106 aaPredicted RBP13.4□□□□□ -0.26
LINC00221-202ENST00000619530 MALRD1Q5VYJ5 2156 aa13.39□□□□□ -0.27
LINC00221-202ENST00000619530 TPD52L2O43399 206 aaKnown RBP13.39□□□□□ -0.27
LINC00221-202ENST00000619530 KHDRBS3O75525 346 aaKnown RBP13.39□□□□□ -0.27
LINC00221-202ENST00000619530 GCH1P30793 250 aa13.39□□□□□ -0.27
LINC00221-202ENST00000619530 CDKN2AP42771 156 aaKnown RBP13.39□□□□□ -0.27
LINC00221-202ENST00000619530 FXYD6P3P58550 94 aa13.39□□□□□ -0.27
LINC00221-202ENST00000619530 EFNB1P98172 346 aa13.39□□□□□ -0.27
LINC00221-202ENST00000619530 RGS21Q2M5E4 152 aa13.39□□□□□ -0.27
LINC00221-202ENST00000619530 ZNF718Q3SXZ3 478 aa13.39□□□□□ -0.27
LINC00221-202ENST00000619530 CHRFAM7AQ494W8 412 aa13.39□□□□□ -0.27
LINC00221-202ENST00000619530 ZNF620Q6ZNG0 422 aa13.39□□□□□ -0.27
LINC00221-202ENST00000619530 ZNF101Q8IZC7 436 aa13.39□□□□□ -0.27
LINC00221-202ENST00000619530 PROKR2Q8NFJ6 384 aa13.39□□□□□ -0.27
LINC00221-202ENST00000619530 SLC25A40Q8TBP6 338 aa13.39□□□□□ -0.27
LINC00221-202ENST00000619530 RDH5Q92781 318 aa13.39□□□□□ -0.27
LINC00221-202ENST00000619530 SRA1Q9HD15 236 aaKnown RBP13.39□□□□□ -0.27
LINC00221-202ENST00000619530 FGF20Q9NP95 211 aaPredicted RBP13.39□□□□□ -0.27
LINC00221-202ENST00000619530 LMX1BO60663 402 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 CDC14BO60729 498 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 GPANK1O95872 356 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 TGFAP01135 160 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 NGFP01138 241 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 MYL12AP19105 171 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 IL2RGP31785 369 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 MPV17P39210 176 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 PPP1CBP62140 327 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 CCL8P80075 99 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 RAB40BQ12829 278 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 MLLT11Q13015 90 aaPredicted RBP13.38□□□□□ -0.27
LINC00221-202ENST00000619530 RIN1Q13671 783 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 SPHARQ15513 63 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 SSX1Q16384 188 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 GLB1L2Q8IW92 636 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 CENPSQ8N2Z9 138 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 OR4Q3Q8NH05 313 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 CHPT1Q8WUD6 406 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 YIPF5Q969M3 257 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 RNFT2Q96EX2 444 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 C4orf45Q96LM5 186 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 SAMD8Q96LT4 415 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 TSSK2Q96PF2 358 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 SOX7Q9BT81 388 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 CENPOQ9BU64 300 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 IFT27Q9BW83 186 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 BEX2Q9BXY8 128 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 NXF2Q9GZY0 626 aaKnown RBP13.38□□□□□ -0.27
LINC00221-202ENST00000619530 NUAK2Q9H093 628 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 NARFLQ9H6Q4 476 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 MRPS18AQ9NVS2 196 aaKnown RBP13.38□□□□□ -0.27
LINC00221-202ENST00000619530 CHCHD3Q9NX63 227 aaKnown RBP13.38□□□□□ -0.27
LINC00221-202ENST00000619530 CLEC2DQ9UHP7 191 aa13.38□□□□□ -0.27
LINC00221-202ENST00000619530 EXOSC1Q9Y3B2 195 aaKnown RBP13.38□□□□□ -0.27
LINC00221-202ENST00000619530 IGLV3-9A0A075B6K5 115 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 C17orf100A8MU93 164 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 MAGEB3O15480 346 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 PPIHO43447 177 aaKnown RBP13.37□□□□□ -0.27
LINC00221-202ENST00000619530 SGCEO43556 437 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 SULT1C4O75897 302 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 NCR1O76036 304 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 HMGN1P05114 100 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 SLC6A6P31641 620 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 SOX6P35712 828 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 HTR5AP47898 357 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 DBPQ10586 325 aaPredicted RBP13.37□□□□□ -0.27
LINC00221-202ENST00000619530 CLEC12AQ5QGZ9 265 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 FAM166AQ6J272 317 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 UNQ6126/PRO20091Q6UXV3 157 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 GDPGP1Q6ZNW5 385 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 DCDC5Q6ZRR9 648 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 RFPL4BQ6ZWI9 263 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 SYT9Q86SS6 491 aa13.37□□□□□ -0.27
LINC00221-202ENST00000619530 KLF14Q8TD94 323 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms