RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 MSL2Q9HCI7 577 aa6.99□□□□□ -1.29
NEK3-209ENST00000618856 ZNF275Q9NSD4 429 aaPredicted RBP6.99□□□□□ -1.29
NEK3-209ENST00000618856 ZNF319Q9P2F9 582 aa6.99□□□□□ -1.29
NEK3-209ENST00000618856 WARS2Q9UGM6 360 aaKnown RBP6.99□□□□□ -1.29
NEK3-209ENST00000618856 HIVEP2P31629 2446 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 IGHV1-69-2A0A0G2JMI3 117 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 M0R129 80 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 SLC16A6O15403 523 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 XRCC2O43543 280 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 ZNF254O75437 659 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 SRSF10O75494 262 aaKnown RBP6.98□□□□□ -1.29
NEK3-209ENST00000618856 SBK2P0C263 348 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 HTR1FP30939 366 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 NAA10P41227 235 aaPredicted RBP6.98□□□□□ -1.29
NEK3-209ENST00000618856 CX3CR1P49238 355 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 PRKXP51817 358 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 CHN2P52757 468 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 HCCSP53701 268 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 RAD23AP54725 363 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 RIPPLY3P57055 190 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 PSMA6P60900 246 aaKnown RBP6.98□□□□□ -1.29
NEK3-209ENST00000618856 FAM3AP98173 230 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 MALLQ13021 153 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 TRIP10Q15642 601 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 OCLNQ16625 522 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 TSTQ16762 297 aaKnown RBP6.98□□□□□ -1.29
NEK3-209ENST00000618856 ZNF181Q2M3W8 571 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 GLYATL3Q5SZD4 288 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 C6orf52Q5T4I8 152 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 ZNF684Q5T5D7 378 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 Q6ZSR3 168 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 USP51Q70EK9 711 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 PGAP1Q75T13 922 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 CELF2-AS1Q8N7Q2 184 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 OR52H1Q8NGJ2 320 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 OR13G1Q8NGZ3 307 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 ASB17Q8WXJ9 295 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 EME1Q96AY2 570 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 OTULINQ96BN8 352 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 ELMOD3Q96FG2 381 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 ZNF582Q96NG8 517 aaPredicted RBP6.98□□□□□ -1.29
NEK3-209ENST00000618856 RDH12Q96NR8 316 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 OR8B4Q96RC9 309 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 SIGLEC11Q96RL6 698 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 IL4I1Q96RQ9 567 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 CNN2Q99439 309 aaKnown RBP6.98□□□□□ -1.29
NEK3-209ENST00000618856 SOX7Q9BT81 388 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 EGLN1Q9GZT9 426 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 RIBC2Q9H4K1 309 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 RGCCQ9H4X1 137 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 SP140LQ9H930 580 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 CENPMQ9NSP4 180 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 DECR2Q9NUI1 292 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 CLN6Q9NWW5 311 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 TMEM160Q9NX00 188 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 MRPL15Q9P015 296 aaKnown RBP6.98□□□□□ -1.29
NEK3-209ENST00000618856 COPS3Q9UNS2 423 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 LRP12Q9Y561 859 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 CACNG2Q9Y698 323 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 TMEM14AQ9Y6G1 99 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 DNHD1Q96M86 4753 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 ABCA1O95477 2261 aa6.98□□□□□ -1.29
NEK3-209ENST00000618856 hCG_38984A0A1B0GV85 526 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 CD300LBA8K4G0 201 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 H0YL77 283 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 PHYHO14832 338 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 WNT9BO14905 357 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 CASQ2O14958 399 aaPredicted RBP6.97□□□□□ -1.29
NEK3-209ENST00000618856 GMDSO60547 372 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 H2BFMP0C1H6 154 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 SLC2A1P11166 492 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 TNFRSF1AP19438 455 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 IL2RGP31785 369 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 DDOSTP39656 456 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 CD200P41217 278 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 GPR6P46095 362 aaPredicted RBP6.97□□□□□ -1.29
NEK3-209ENST00000618856 GZMKP49863 264 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 MMP16P51512 607 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 ZNF121P58317 390 aaPredicted RBP6.97□□□□□ -1.29
NEK3-209ENST00000618856 CDC42P60953 191 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 ISL1P61371 349 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 LMO4P61968 165 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 TNFAIP6P98066 277 aaPredicted RBP6.97□□□□□ -1.29
NEK3-209ENST00000618856 EGR3Q06889 387 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 MAB21L1Q13394 359 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 OR8B8Q15620 311 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 ZSCAN26Q16670 478 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 HFEQ30201 348 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 DMRTA1Q5VZB9 504 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 KCTD18Q6PI47 426 aaPredicted RBP6.97□□□□□ -1.29
NEK3-209ENST00000618856 ZBTB49Q6ZSB9 765 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 KLBQ86Z14 1044 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 ZNF679Q8IYX0 411 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 RFLNBQ8N5W9 214 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 PLPP7Q8NBV4 271 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 OR2Z1Q8NG97 314 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 OR2AE1Q8NHA4 323 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 Q8TCH9 128 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 THEM6Q8WUY1 208 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 UBE2FQ969M7 185 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms