RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 BBS1Q8NFJ9 593 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 OR52H1Q8NGJ2 320 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 PYDC1Q8WXC3 89 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 OR2V2Q96R30 315 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 AMELYQ99218 206 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 CIB1Q99828 191 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 YIPF3Q9GZM5 350 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 SEMA6AQ9H2E6 1030 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 NIPAL2Q9H841 368 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 PPP1R3CQ9UQK1 317 aa13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 ANK3Q12955 4377 aaKnown RBP13.08□□□□□ -0.32
SRGAP2C-205ENST00000617209 CD300LBA8K4G0 201 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 H3BNX3 289 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 MLNRO43193 412 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 XRCC2O43543 280 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 PRKYO43930 277 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 ANPEPP15144 967 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 IGFBP5P24593 272 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 HSD11B1P28845 292 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 DDOSTP39656 456 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 GATA4P43694 442 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 SRP9P49458 86 aaKnown RBP13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 DVL1P1P54792 670 aaPredicted RBP13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 MVKQ03426 396 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 AADACL4Q5VUY2 407 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 DEGS2Q6QHC5 323 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 MRPL21Q7Z2W9 205 aaKnown RBP13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 ITLN1Q8WWA0 313 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 RBM4BQ9BQ04 359 aaKnown RBP13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 GABARAPL3Q9BY60 117 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 GCM1Q9NP62 436 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 TMEM106BQ9NUM4 274 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 TREM2Q9NZC2 230 aa13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 NOP16Q9Y3C1 178 aaKnown RBP13.07□□□□□ -0.32
SRGAP2C-205ENST00000617209 ATRQ13535 2644 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 H0YL77 283 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 GMDSO60547 372 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 SELENOFO60613 162 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 FSTL3O95633 263 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 H2BFMP0C1H6 154 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 CX3CR1P49238 355 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 RPS7P62081 194 aaKnown RBP13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 ZNF181Q2M3W8 571 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 GLYATL3Q5SZD4 288 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 AVPI1Q5T686 147 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 LCN1P1Q5VSP4 162 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 NXNL2Q5VZ03 156 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 KCTD18Q6PI47 426 aaPredicted RBP13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 SPATC1Q76KD6 591 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 MEPCEQ7L2J0 689 aaKnown RBP13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 KLBQ86Z14 1044 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 TCEANCQ8N8B7 351 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 BHLHE23Q8NDY6 225 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 TMEM163Q8TC26 289 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 THEM6Q8WUY1 208 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 SPRYD4Q8WW59 207 aaPredicted RBP13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 ERGIC1Q969X5 290 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 SGK3Q96BR1 496 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 RAB39BQ96DA2 213 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 MEGF10Q96KG7 1140 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 PKP2Q99959 881 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 BEX2Q9BXY8 128 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 SHARPINQ9H0F6 387 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 ZNF665Q9H7R5 613 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 NPTNQ9Y639 398 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 TMEM14AQ9Y6G1 99 aa13.06□□□□□ -0.32
SRGAP2C-205ENST00000617209 C5orf63A6NC05 138 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 CCDC182A6NF36 153 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 SLC22A31A6NKX4 558 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 FAM157AC9JC47 383 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 PTBP3O95758 552 aaKnown RBP13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 SLC2A1P11166 492 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 PCMT1P22061 227 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 ANOS1P23352 680 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 CFL1P23528 166 aaKnown RBP13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 DCTDP32321 178 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 CD200P41217 278 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 NAA10P41227 235 aaPredicted RBP13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 MAB21L1Q13394 359 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 FAM120AOSQ5T036 256 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 LRRC28Q86X40 367 aaPredicted RBP13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 PRIMA1Q86XR5 153 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 PLPP7Q8NBV4 271 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 OR10AD1Q8NGE0 317 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 OR2AE1Q8NHA4 323 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 ITFG2Q969R8 447 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 RAB3IPQ96QF0 476 aaPredicted RBP13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 SIGLEC11Q96RL6 698 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 RGCCQ9H4X1 137 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 NARFLQ9H6Q4 476 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 HAO2Q9NYQ3 351 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 USE1Q9NZ43 259 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 MRPL15Q9P015 296 aaKnown RBP13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 H2AFY2Q9P0M6 372 aaPredicted RBP13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 LAMP5Q9UJQ1 280 aa13.05□□□□□ -0.32
SRGAP2C-205ENST00000617209 WNK2Q9Y3S1 2297 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 GGT3PA6NGU5 568 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 ACOD1A6NK06 481 aa13.04□□□□□ -0.32
SRGAP2C-205ENST00000617209 F5H5P2 479 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms