RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 SYNGR4O95473 234 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 CD2P06729 351 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 ZNF24P17028 368 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 EIF2S3P41091 472 aaKnown RBP6.83□□□□□ -1.32
NEK3-207ENST00000617054 POU3F4P49335 361 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 MRPL28Q13084 256 aaKnown RBP6.83□□□□□ -1.32
NEK3-207ENST00000617054 ZNF813Q6ZN06 617 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 RTN4RL2Q86UN3 420 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 FAM109AQ8N4B1 249 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 NAXEQ8NCW5 288 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 OR4D6Q8NGJ1 314 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 OR5D18Q8NGL1 313 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 SCMH1Q96GD3 660 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 LYZL4Q96KX0 146 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 PRRX2Q99811 253 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 B3GNT4Q9C0J1 378 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 ZNF275Q9NSD4 429 aaPredicted RBP6.83□□□□□ -1.32
NEK3-207ENST00000617054 ABRACLQ9P1F3 81 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 PRSS50Q9UI38 385 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 ADAM30Q9UKF2 790 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 PCNX1Q96RV3 2341 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 ATRXP46100 2492 aa6.83□□□□□ -1.32
NEK3-207ENST00000617054 ZNF891A8MT65 544 aaPredicted RBP6.82□□□□□ -1.32
NEK3-207ENST00000617054 HLA-HP01893 362 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 APOA1P02647 267 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 RAF1P04049 648 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 PSG4Q00888 419 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 DEGS2Q6QHC5 323 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 ZNF704Q6ZNC4 412 aaPredicted RBP6.82□□□□□ -1.32
NEK3-207ENST00000617054 SLC16A14Q7RTX9 510 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 SLC22A24Q8N4F4 322 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 TMEM178AQ8NBL3 297 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 WDYHV1Q96HA8 205 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 PGAM5Q96HS1 289 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 RNF170Q96K19 258 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 CNTNAP3BQ96NU0 1288 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 CNTNAP3Q9BZ76 1288 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 TMEM38BQ9NVV0 291 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 CKLFQ9UBR5 152 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 STEAP1Q9UHE8 339 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 MCTS1Q9ULC4 181 aaKnown RBP6.82□□□□□ -1.32
NEK3-207ENST00000617054 SPTA1P02549 2419 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 A8MV72 311 aaPredicted RBP6.82□□□□□ -1.32
NEK3-207ENST00000617054 SGCEO43556 437 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 PTTG1O95997 202 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 ISG15P05161 165 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 LSM6P62312 80 aaKnown RBP6.82□□□□□ -1.32
NEK3-207ENST00000617054 ARF1P84077 181 aaKnown RBP6.82□□□□□ -1.32
NEK3-207ENST00000617054 KCNMB1Q16558 191 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 UBE2NLQ5JXB2 153 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 ELFN2Q5R3F8 820 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 PDSS1Q5T2R2 415 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 FAM27BQ5VT28 67 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 TMEM244Q5VVB8 128 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 ZNF544Q6NX49 715 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 C3P1Q6ZMU1 363 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 PHYHIPQ92561 330 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 HPS1Q92902 700 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 PNPLA2Q96AD5 504 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 FAM3DQ96BQ1 224 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 TAAR6Q96RI8 345 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 KCNJ15Q99712 375 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 GSX2Q9BZM3 304 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 CNTD2Q9H8S5 307 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 SP140LQ9H930 580 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 POU2F3Q9UKI9 436 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 TPRP12270 2363 aaKnown RBP6.82□□□□□ -1.32
NEK3-207ENST00000617054 A0A1B0GVI7 797 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 M0R135 149 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 ACOT7O00154 380 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 HLA-DQB1P01920 261 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 UBCP0CG48 685 aaKnown RBP6.82□□□□□ -1.32
NEK3-207ENST00000617054 FAHP16930 419 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 DDOSTP39656 456 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 NHLH1Q02575 133 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 RTP5Q14D33 572 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 TSC22D1Q15714 1073 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 MCEMP1Q8IX19 187 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 CPEB3Q8NE35 698 aaKnown RBP6.82□□□□□ -1.32
NEK3-207ENST00000617054 ZNF799Q96GE5 643 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 SLCO5A1Q9H2Y9 848 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 OR51B6Q9H340 312 aa6.82□□□□□ -1.32
NEK3-207ENST00000617054 NUFIP1Q9UHK0 495 aaKnown RBP6.82□□□□□ -1.32
NEK3-207ENST00000617054 PTPRQQ9UMZ3 2332 aa6.81□□□□□ -1.32
NEK3-207ENST00000617054 TMEM272A0A1B0GTI8 110 aa6.81□□□□□ -1.32
NEK3-207ENST00000617054 HSPB2A8KAH6 182 aa6.81□□□□□ -1.32
NEK3-207ENST00000617054 LYRM1O43325 122 aa6.81□□□□□ -1.32
NEK3-207ENST00000617054 DNPH1O43598 174 aa6.81□□□□□ -1.32
NEK3-207ENST00000617054 MT-ND4P03905 459 aa6.81□□□□□ -1.32
NEK3-207ENST00000617054 ARSBP15848 533 aa6.81□□□□□ -1.32
NEK3-207ENST00000617054 IGFBP3P17936 291 aaPredicted RBP6.81□□□□□ -1.32
NEK3-207ENST00000617054 ACHEP22303 614 aa6.81□□□□□ -1.32
NEK3-207ENST00000617054 HTR2CP28335 458 aa6.81□□□□□ -1.32
NEK3-207ENST00000617054 HTR5AP47898 357 aa6.81□□□□□ -1.32
NEK3-207ENST00000617054 ART1P52961 327 aa6.81□□□□□ -1.32
NEK3-207ENST00000617054 MRPS34P82930 218 aaKnown RBP6.81□□□□□ -1.32
NEK3-207ENST00000617054 HSPB2Q16082 182 aa6.81□□□□□ -1.32
NEK3-207ENST00000617054 MOGAT2Q3SYC2 334 aa6.81□□□□□ -1.32
NEK3-207ENST00000617054 SLC36A2Q495M3 483 aa6.81□□□□□ -1.32
NEK3-207ENST00000617054 TMEM69Q5SWH9 247 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms