RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 PYURFQ96I23 114 aa9.91□□□□□ -0.82
CNTNAP3B-211ENST00000612828 DOCK6Q96HP0 2047 aa9.91□□□□□ -0.82
CNTNAP3B-211ENST00000612828 LOC730098B7Z3J9 87 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 ACHEP22303 614 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 ACRV1P26436 265 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 PTGER3P43115 390 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 BLOC1S3Q6QNY0 202 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 OR52E1Q8NGJ3 308 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 OR2T4Q8NH00 348 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 Q8WTZ3 238 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 RAB1CQ92928 201 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 GABARAPL3Q9BY60 117 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 KCNG2Q9UJ96 466 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 ABCA4P78363 2273 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 OR6C75A6NL08 312 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 FAM189A1O60320 539 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 DUS4LO95620 317 aaKnown RBP9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 TEKQ02763 1124 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 ZNF528Q3MIS6 628 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 SIRT6Q8N6T7 355 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 C12orf76Q8N812 135 aaPredicted RBP9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 MDS2Q8NDY4 140 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 OR2T11Q8NH01 316 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 FER1L6-AS2Q96M78 137 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 EMCNQ9ULC0 261 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 C10orf71Q711Q0 1435 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 A0A096LPE4 126 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 A0A1W2PPZ6 126 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 A8MWL6 223 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 PPP6CO00743 305 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 TMEM176BQ3YBM2 270 aaPredicted RBP9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 DNLZQ5SXM8 178 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 DBF4BQ8NFT6 615 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 OR4B1Q8NGF8 309 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 ZMAT3Q9HA38 289 aaKnown RBP9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 FBXL2Q9UKC9 423 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 SLC22A1O15245 554 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 PRAMEF2O60811 474 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 DDAH2O95865 285 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 PTGER1P34995 402 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 FAM209BQ5JX69 171 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 OR13D1Q8NGV5 346 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 BCL7BQ9BQE9 202 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 ZNF385DQ9H6B1 395 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 LIPT1Q9Y234 373 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 RNF11Q9Y3C5 154 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 MEIKINA0A087WXM9 373 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 KRBA1A5PL33 1030 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 ANKRD34CP0C6C1 535 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 FCGR2BP31994 310 aaPredicted RBP9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 FCGR2CP31995 323 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 C6orf136Q5SQH8 315 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 DNASE2BQ8WZ79 361 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 ZPBPQ9BS86 351 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 GHITMQ9H3K2 345 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 DNAJB12Q9NXW2 375 aaKnown RBP9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 SLC45A2Q9UMX9 530 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 MRPS16Q9Y3D3 137 aaKnown RBP9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 DNAJC15Q9Y5T4 150 aa9.9□□□□□ -0.82
CNTNAP3B-211ENST00000612828 HAPLN1P10915 354 aaPredicted RBP9.9□□□□□ -0.83
CNTNAP3B-211ENST00000612828 SRMP19623 302 aa9.9□□□□□ -0.83
CNTNAP3B-211ENST00000612828 HBMQ6B0K9 141 aa9.9□□□□□ -0.83
CNTNAP3B-211ENST00000612828 FAM53AQ6NSI3 398 aaPredicted RBP9.9□□□□□ -0.83
CNTNAP3B-211ENST00000612828 C2CD4AQ8NCU7 369 aaPredicted RBP9.9□□□□□ -0.83
CNTNAP3B-211ENST00000612828 RAB1BQ9H0U4 201 aa9.9□□□□□ -0.83
CNTNAP3B-211ENST00000612828 GLRX2Q9NS18 164 aa9.9□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ASB1Q9Y576 335 aa9.9□□□□□ -0.83
CNTNAP3B-211ENST00000612828 F2RL2O00254 374 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ALDOCP09972 364 aaKnown RBP9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 DDB2Q92466 427 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CAPNS2Q96L46 248 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 NTMQ9P121 344 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 A0A087WV62 115 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 MT-ND4LP03901 98 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 IQCF3P0C7M6 154 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ZNF91Q05481 1191 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CYBRD1Q53TN4 286 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 TECRLQ5HYJ1 363 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 SPNS2Q8IVW8 549 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 RANGRFQ9HD47 186 aaPredicted RBP9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CYSLTR2Q9NS75 346 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 SIRT3Q9NTG7 399 aaPredicted RBP9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 STRAPQ9Y3F4 350 aaKnown RBP9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 UBR1Q8IWV7 1749 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 RICTORQ6R327 1708 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 DIRC3C9JPN6 131 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ZNF26P17031 533 aaPredicted RBP9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 HTR6P50406 440 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 MIDNQ504T8 468 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CHRDL1Q9BU40 450 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 CXXC4Q9H2H0 198 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 PLEKHA2Q9HB19 425 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 NIT2Q9NQR4 276 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 FRS3O43559 492 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 ACSM4P0C7M7 580 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 NUDT1P36639 197 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 KIR3DL2P43630 455 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 RAB1AP62820 205 aa9.89□□□□□ -0.83
CNTNAP3B-211ENST00000612828 LRRC10Q5BKY1 277 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms