RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 ZNF570Q96NI8 536 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 WACQ9BTA9 647 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 EMC6Q9BV81 110 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 SSBP4Q9BWG4 385 aaPredicted RBP5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 ULBP2Q9BZM5 246 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 GABARAPL1Q9H0R8 117 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 MMP28Q9H239 520 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 SAP30LQ9HAJ7 183 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 TMEM165Q9HC07 324 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 GPR35Q9HC97 309 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 S100A14Q9HCY8 104 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 DECR2Q9NUI1 292 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 DCAF16Q9NXF7 216 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 VNN3Q9NY84 501 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 FBLN5Q9UBX5 448 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 GPR160Q9UJ42 338 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 RPUSD1Q9UJJ7 312 aaKnown RBP5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 FOXJ3Q9UPW0 622 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 POFUT2Q9Y2G5 429 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 NPTNQ9Y639 398 aa5.96□□□□□ -1.46
PTCHD3P1-201ENST00000612350 STAB2Q8WWQ8 2551 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 IGHV2-70DA0A0C4DH43 119 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 PRSS37A4D1T9 235 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 ERICH4A6NGS2 130 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 H3BNX3 289 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 M0R3G1 203 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 TPD52L2O43399 206 aaKnown RBP5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 FARS2O95363 451 aaKnown RBP5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 HLA-HP01893 362 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 QDPRP09417 244 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 OSMP13725 252 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 ZNF26P17031 533 aaPredicted RBP5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 CRABP1P29762 137 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 ERFP50548 548 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 FXYD6P3P58550 94 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 ESRRGP62508 458 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 ERVK-25P63136 954 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 SLC3A1Q07837 685 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 PPP1R8Q12972 351 aaKnown RBP5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 TOP3AQ13472 1001 aaPredicted RBP5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 MELKQ14680 651 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 CEACAM16Q2WEN9 425 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 TMEM155Q4W5P6 130 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 SPRNQ5BIV9 151 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 GPR157Q5UAW9 335 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 CARD17Q5XLA6 110 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 RGS7BPQ6MZT1 257 aaPredicted RBP5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 FAHD1Q6P587 224 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 LRFN4Q6PJG9 635 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 DNM1P34Q6PK57 102 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 BTNL3Q6UXE8 466 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 GDPGP1Q6ZNW5 385 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 TMEM179BQ7Z7N9 219 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 LRRC28Q86X40 367 aaPredicted RBP5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 LYG1Q8N1E2 194 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 LNX2Q8N448 690 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 KLHL36Q8N4N3 616 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 SPICQ8N5J4 248 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 OR4S1Q8NGB4 309 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 TEX47Q8TBZ9 253 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 RAB40AQ8WXH6 277 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 HDAC2Q92769 488 aaKnown RBP5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 ERMAPQ96PL5 475 aaPredicted RBP5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 FOXB1Q99853 325 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 NIPSNAP1Q9BPW8 284 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 IFT27Q9BW83 186 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 PRRG3Q9BZD7 231 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 C8orf4Q9NR00 106 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 PAPOLBQ9NRJ5 636 aaKnown RBP5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 SLCO1C1Q9NYB5 712 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 VSX1Q9NZR4 365 aaPredicted RBP5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 KIF17Q9P2E2 1029 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 OR5V1Q9UGF6 321 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 FBXL3Q9UKT7 428 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 IER3IP1Q9Y5U9 82 aa5.95□□□□□ -1.46
PTCHD3P1-201ENST00000612350 TEX13CA0A0J9YWL9 993 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 KIR2DS1A0A191URI9 304 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 SLC22A23A1A5C7 686 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 RBMY1BA6NDE4 496 aaKnown RBP5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 RBMY1EA6NEQ0 496 aaKnown RBP5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 H3BN98 237 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 BHLHE40O14503 412 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 RENP00797 406 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 IFNGP01579 166 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 IGHV1-46P01743 117 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 HMGN1P05114 100 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 WNT2P09544 360 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 RBMY1DP0C7P1 496 aaKnown RBP5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 OR8G3PP0DMU2 310 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 PRKACGP22612 351 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 PTDSS1P48651 473 aaKnown RBP5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 CENPAP49450 140 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 EFNB2P52799 333 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 BLVRAP53004 296 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 KLF3P57682 345 aaPredicted RBP5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 ERVS71-1P61550 626 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 MRPS34P82930 218 aaKnown RBP5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 GALK2Q01415 458 aa5.94□□□□□ -1.46
PTCHD3P1-201ENST00000612350 EMX1Q04741 257 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms