RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 HOXA1P49639 335 aaPredicted RBP6.19□□□□□ -1.42
CBWD1-219ENST00000611457 PRKAG1P54619 331 aa6.19□□□□□ -1.42
CBWD1-219ENST00000611457 MXD1Q05195 221 aa6.19□□□□□ -1.42
CBWD1-219ENST00000611457 TMEM155Q4W5P6 130 aa6.19□□□□□ -1.42
CBWD1-219ENST00000611457 B3GLCTQ6Y288 498 aa6.19□□□□□ -1.42
CBWD1-219ENST00000611457 WDR53Q7Z5U6 358 aaPredicted RBP6.19□□□□□ -1.42
CBWD1-219ENST00000611457 PIP4P2Q8N4L2 257 aa6.19□□□□□ -1.42
CBWD1-219ENST00000611457 ZNF283Q8N7M2 679 aa6.19□□□□□ -1.42
CBWD1-219ENST00000611457 ARIH2OSQ8N7S6 290 aa6.19□□□□□ -1.42
CBWD1-219ENST00000611457 OTUB1Q96FW1 271 aaPredicted RBP6.19□□□□□ -1.42
CBWD1-219ENST00000611457 POM121Q96HA1 1249 aa6.19□□□□□ -1.42
CBWD1-219ENST00000611457 ERMAPQ96PL5 475 aaPredicted RBP6.19□□□□□ -1.42
CBWD1-219ENST00000611457 OR5M11Q96RB7 305 aa6.19□□□□□ -1.42
CBWD1-219ENST00000611457 SAV1Q9H4B6 383 aaPredicted RBP6.19□□□□□ -1.42
CBWD1-219ENST00000611457 RPS6KB2Q9UBS0 482 aa6.19□□□□□ -1.42
CBWD1-219ENST00000611457 POLEQ07864 2286 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 PTPRZ1P23471 2315 aaPredicted RBP6.18□□□□□ -1.42
CBWD1-219ENST00000611457 hCG_1807616A0A1W2PRN6 198 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 C17orf51A8MQB3 221 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 E7EQL1 145 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 APOC1P02654 83 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 CD1AP06126 327 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 GALP22466 123 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 KRTAP10-9P60411 292 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 HNRNPA0Q13151 305 aaKnown RBP6.18□□□□□ -1.42
CBWD1-219ENST00000611457 ENDOGQ14249 297 aaKnown RBP6.18□□□□□ -1.42
CBWD1-219ENST00000611457 SPHARQ15513 63 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 MICAQ29983 383 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 KLHL22Q53GT1 634 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 C12orf73Q69YU5 71 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 ZNF584Q8IVC4 421 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 TMEM99Q8N816 258 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 ZNF417Q8TAU3 575 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 TMEM171Q8WVE6 324 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 HSH2DQ96JZ2 352 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 ZNF587Q96SQ5 575 aaPredicted RBP6.18□□□□□ -1.42
CBWD1-219ENST00000611457 SHARPINQ9H0F6 387 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 DNTTIP1Q9H147 329 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 PNRC2Q9NPJ4 139 aaKnown RBP6.18□□□□□ -1.42
CBWD1-219ENST00000611457 PFDN2Q9UHV9 154 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 VDAC3Q9Y277 283 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 GSTK1Q9Y2Q3 226 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 ANK3Q12955 4377 aaKnown RBP6.18□□□□□ -1.42
CBWD1-219ENST00000611457 SEC16AO15027 2179 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 A0A1B0GVI7 797 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 M0R233 179 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 DHHO43323 396 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 SYNGR3O43761 229 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 SELEP16581 610 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 CD200P41217 278 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 COMPP49747 757 aaPredicted RBP6.18□□□□□ -1.42
CBWD1-219ENST00000611457 DVL1P1P54792 670 aaPredicted RBP6.18□□□□□ -1.42
CBWD1-219ENST00000611457 POLR2GP62487 172 aaKnown RBP eCLIP6.18□□□□□ -1.42
CBWD1-219ENST00000611457 HGFACQ04756 655 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 FAM27E3Q08E93 113 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 IL18Q14116 193 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 NDUFAF6Q330K2 333 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 FDX2Q6P4F2 183 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 C22orf34Q6ZV56 151 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 OR6M1Q8NGM8 313 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 JSRP1Q96MG2 331 aaPredicted RBP6.18□□□□□ -1.42
CBWD1-219ENST00000611457 HS3ST6Q96QI5 342 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 SOSTQ9BQB4 213 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 WFDC6Q9BQY6 131 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 YIPF4Q9BSR8 244 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 NCOR1P1Q9H4R4 102 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 COPS3Q9UNS2 423 aa6.18□□□□□ -1.42
CBWD1-219ENST00000611457 NPIPA5A0A0B4J1W7 369 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 RPS10-NUDT3A0A1W2PQS6 291 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 NPIPA7E9PJI5 369 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 TNFRSF11BO00300 401 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 SMPD2O60906 423 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 CCNB2O95067 398 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 LALBAP00709 142 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 NPIPA8P0DM63 369 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 OR8G3PP0DMU2 310 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 BMP5P22003 454 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 IDH3GP51553 393 aaPredicted RBP6.17□□□□□ -1.42
CBWD1-219ENST00000611457 RPL15P61313 204 aaKnown RBP6.17□□□□□ -1.42
CBWD1-219ENST00000611457 CDK5Q00535 292 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 RAB35Q15286 201 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 SEC23BQ15437 767 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 SSX1Q16384 188 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 FAM180BQ6P0A1 224 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 MZT2AQ6P582 158 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 LRFN4Q6PJG9 635 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 ZNF620Q6ZNG0 422 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 PTCHD4Q6ZW05 846 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 ZER1Q7Z7L7 766 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 SLC22A24Q8N4F4 322 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 OR52H1Q8NGJ2 320 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 UPRTQ96BW1 309 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 KCTD7Q96MP8 289 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 ZNF385AQ96PM9 386 aaKnown RBP6.17□□□□□ -1.42
CBWD1-219ENST00000611457 FEVQ99581 238 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 C12orf57Q99622 126 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 MND1Q9BWT6 205 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 ZNF436Q9C0F3 470 aaPredicted RBP6.17□□□□□ -1.42
CBWD1-219ENST00000611457 NDUFB11Q9NX14 153 aa6.17□□□□□ -1.42
CBWD1-219ENST00000611457 ZDHHC8Q9ULC8 765 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms