RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 OFCC1Q8IZS5 231 aa14.29□□□□□ -0.12
CHMP4A-211ENST00000609024 C11orf44Q8N8P7 122 aa14.29□□□□□ -0.12
CHMP4A-211ENST00000609024 OR8J3Q8NGG0 315 aa14.29□□□□□ -0.12
CHMP4A-211ENST00000609024 NUAK2Q9H093 628 aa14.29□□□□□ -0.12
CHMP4A-211ENST00000609024 SEMA6AQ9H2E6 1030 aa14.29□□□□□ -0.12
CHMP4A-211ENST00000609024 FBLN5Q9UBX5 448 aa14.29□□□□□ -0.12
CHMP4A-211ENST00000609024 RPUSD1Q9UJJ7 312 aaKnown RBP14.29□□□□□ -0.12
CHMP4A-211ENST00000609024 TMEM5Q9Y2B1 443 aa14.29□□□□□ -0.12
CHMP4A-211ENST00000609024 KDELR2P33947 212 aa14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 TPTEP56180 551 aa14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 SELENOWP63302 87 aa14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 HOXA4Q00056 320 aaPredicted RBP14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 KCNMB1Q16558 191 aa14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 CORO6Q6QEF8 472 aa14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 MBOAT2Q6ZWT7 520 aa14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 FAM122BQ7Z309 247 aa14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 FAM156AQ8NDB6 213 aa14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 OR4S1Q8NGB4 309 aa14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 OR4C13Q8NGP0 309 aa14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 TLCD1Q96CP7 247 aa14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 ATF6BQ99941 703 aa14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 SIRT7Q9NRC8 400 aa14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 NECAP2Q9NVZ3 263 aa14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 VSX1Q9NZR4 365 aaPredicted RBP14.28□□□□□ -0.12
CHMP4A-211ENST00000609024 A0A1W2PRD5 423 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 A0A1W2PRF3 423 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 A0A1W2PRM7 423 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 MEIOCA2RUB1 952 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 RNASEK-C17orf49H0YIS7 233 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 NPFFO15130 113 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 ACSM4P0C7M7 580 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 GRK5P34947 590 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 RPS6KA3P51812 740 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 FHL1Q13642 323 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 MEP1BQ16820 701 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 SLC36A3Q495N2 470 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 COLCA1Q6ZS62 124 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 TMPRSS11FQ6ZWK6 438 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 CALHM3Q86XJ0 350 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 DTX3Q8N9I9 347 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 OR2T6Q8NHC8 308 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 CLPTM1LQ96KA5 538 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 FAM234AQ9H0X4 552 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 TMBIM4Q9HC24 238 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 C14orf119Q9NWQ9 140 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 DNAJB11Q9UBS4 358 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 RAB21Q9UL25 225 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 LHFPL6Q9Y693 200 aa14.27□□□□□ -0.13
CHMP4A-211ENST00000609024 CD300LBA8K4G0 201 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 CDC42EP2O14613 210 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 HLA-DQA2P01906 255 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 HIST1H3AP68431 136 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 DBPQ10586 325 aaPredicted RBP14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 POU4F2Q12837 409 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 TRAP1Q12931 704 aaKnown RBP14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 MICBQ29980 383 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 VAX1Q5SQQ9 334 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 HIST2H3PS2Q5TEC6 136 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 METAP1DQ6UB28 335 aaPredicted RBP14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 HIST2H3AQ71DI3 136 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 SLC36A1Q7Z2H8 476 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 CYP4Z1Q86W10 505 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 FAM90A1Q86YD7 464 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 SPTSSAQ969W0 71 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 NSRP1Q9H0G5 558 aaKnown RBP14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 KRCC1Q9NPI7 259 aaPredicted RBP14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 IER3IP1Q9Y5U9 82 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 PLXNB1O43157 2135 aa14.26□□□□□ -0.13
CHMP4A-211ENST00000609024 IGHV3OR15-7A0A075B7D8 119 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 A0A087WUU8 490 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 J3KTA2 159 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 NDUFB3O43676 98 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 RENP00797 406 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 MDH1P40925 334 aaKnown RBP14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 TBPL2Q6SJ96 375 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 C1orf122Q6ZSJ8 110 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 FKBP9P1Q75LS8 142 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 LINC00346Q8IVM7 164 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 LNX2Q8N448 690 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 OR2T12Q8NG77 320 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 OR8S1Q8NH09 359 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 FAM46AQ96IP4 442 aaKnown RBP14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 TMEM120AQ9BXJ8 343 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 TOR3AQ9H497 397 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 SRA1Q9HD15 236 aaKnown RBP14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 RAB18Q9NP72 206 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 NRIP3Q9NQ35 241 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 MRPL15Q9P015 296 aaKnown RBP14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 KAAG1Q9UBP8 84 aa14.25□□□□□ -0.13
CHMP4A-211ENST00000609024 FAM220BPB1ANY3 271 aa14.24□□□□□ -0.13
CHMP4A-211ENST00000609024 BHLHE40O14503 412 aa14.24□□□□□ -0.13
CHMP4A-211ENST00000609024 ZNF682O95780 498 aa14.24□□□□□ -0.13
CHMP4A-211ENST00000609024 NPPAP01160 153 aa14.24□□□□□ -0.13
CHMP4A-211ENST00000609024 VSIG10L2P0DP72 767 aa14.24□□□□□ -0.13
CHMP4A-211ENST00000609024 OXLD1Q5BKU9 147 aa14.24□□□□□ -0.13
CHMP4A-211ENST00000609024 LRRC10Q5BKY1 277 aa14.24□□□□□ -0.13
CHMP4A-211ENST00000609024 CFAP77Q6ZQR2 320 aa14.24□□□□□ -0.13
CHMP4A-211ENST00000609024 ZNF826PQ6ZT77 177 aa14.24□□□□□ -0.13
CHMP4A-211ENST00000609024 TSEN54Q7Z6J9 526 aaKnown RBP14.24□□□□□ -0.13
CHMP4A-211ENST00000609024 NAA40Q86UY6 237 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms