RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 PRR32B1ATL7 298 aa11.26□□□□□ -0.61
CTCFL-218ENST00000608440 CDC40O60508 579 aaKnown RBP eCLIP11.26□□□□□ -0.61
CTCFL-218ENST00000608440 RAB7AP51149 207 aa11.26□□□□□ -0.61
CTCFL-218ENST00000608440 NOVA1P51513 510 aaKnown RBP11.26□□□□□ -0.61
CTCFL-218ENST00000608440 ELLP55199 621 aaPredicted RBP11.26□□□□□ -0.61
CTCFL-218ENST00000608440 C1orf194Q5T5A4 169 aa11.26□□□□□ -0.61
CTCFL-218ENST00000608440 PRAMEF8Q5VWM4 474 aa11.26□□□□□ -0.61
CTCFL-218ENST00000608440 PRAMEF7Q5VXH5 474 aa11.26□□□□□ -0.61
CTCFL-218ENST00000608440 ZNF584Q8IVC4 421 aa11.26□□□□□ -0.61
CTCFL-218ENST00000608440 COMMD1Q8N668 190 aa11.26□□□□□ -0.61
CTCFL-218ENST00000608440 RSC1A1Q92681 617 aa11.26□□□□□ -0.61
CTCFL-218ENST00000608440 TMEM106AQ96A25 262 aa11.26□□□□□ -0.61
CTCFL-218ENST00000608440 FAM3DQ96BQ1 224 aa11.26□□□□□ -0.61
CTCFL-218ENST00000608440 SLC17A5Q9NRA2 495 aa11.26□□□□□ -0.61
CTCFL-218ENST00000608440 KLHL28Q9NXS3 571 aa11.26□□□□□ -0.61
CTCFL-218ENST00000608440 USP36Q9P275 1121 aaKnown RBP11.26□□□□□ -0.61
CTCFL-218ENST00000608440 FOXD3Q9UJU5 478 aaPredicted RBP11.26□□□□□ -0.61
CTCFL-218ENST00000608440 SRPK3Q9UPE1 567 aa11.26□□□□□ -0.61
CTCFL-218ENST00000608440 ZFP30Q9Y2G7 519 aa11.26□□□□□ -0.61
CTCFL-218ENST00000608440 XKRY2A2RUG3 117 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 H7C4K7 107 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 XKRYO14609 159 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 PI3P19957 117 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 LRRC73Q5JTD7 316 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 RIPPLY2Q5TAB7 128 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 NUDT10Q8NFP7 164 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 OR52N4Q8NGI2 321 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 OR5AK2Q8NH90 309 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 MARCH1Q8TCQ1 289 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 TSLPQ969D9 159 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 VPS25Q9BRG1 176 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 SGPP1Q9BX95 441 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 OR2J1Q9GZK6 312 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 OR11A1Q9GZK7 315 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 CLDND1Q9NY35 253 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 OR52A1Q9UKL2 312 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 SLC16A5O15375 505 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 SLC35G6P0C7Q6 338 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 GDI1P31150 447 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 FCGR2CP31995 323 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 OR1D2P34982 312 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 RPL4P36578 427 aaKnown RBP11.25□□□□□ -0.61
CTCFL-218ENST00000608440 WNT5AP41221 380 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 MAPK8P45983 427 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 KHKP50053 298 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 TBPL1P62380 186 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 SLC35A1P78382 337 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 ZNF429Q86V71 674 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 C1orf87Q8N0U7 546 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 FBXO22Q8NEZ5 403 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 OR4X1Q8NH49 305 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 PRRT1Q99946 306 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 OR8D2Q9GZM6 311 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 GLIPR2Q9H4G4 154 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 BCL2L10Q9HD36 194 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 LUZP4Q9P127 313 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 LHX3Q9UBR4 397 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 YBX2Q9Y2T7 364 aaKnown RBP11.25□□□□□ -0.61
CTCFL-218ENST00000608440 DOCK6Q96HP0 2047 aa11.25□□□□□ -0.61
CTCFL-218ENST00000608440 GOLGA4Q13439 2230 aaKnown RBP11.25□□□□□ -0.61
CTCFL-218ENST00000608440 ZNF705FA8MVS1 300 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-218ENST00000608440 PLPP1O14494 284 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 TAAR5O14804 337 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 BNIP3LO60238 219 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 RCBTB2O95199 551 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 KLF8O95600 359 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-218ENST00000608440 HPRT1P00492 218 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 CKMP06732 381 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 ZNF705DP0CH99 300 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-218ENST00000608440 ZNF705BP0CI00 300 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-218ENST00000608440 CSRP1P21291 193 aaKnown RBP11.24□□□□□ -0.61
CTCFL-218ENST00000608440 RPL12P30050 165 aaKnown RBP11.24□□□□□ -0.61
CTCFL-218ENST00000608440 CHRNB4P30926 498 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 DIO1P49895 249 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 TMEM33P57088 247 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 PRPS1P60891 318 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 COL10A1Q03692 680 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 TGM3Q08188 693 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 P2RY6Q15077 328 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 FAM78AQ5JUQ0 283 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 ABLIM2Q6H8Q1 611 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 IFI44Q8TCB0 444 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 FBXO32Q969P5 355 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 ZNF689Q96CS4 500 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-218ENST00000608440 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.24□□□□□ -0.61
CTCFL-218ENST00000608440 CUTCQ9NTM9 273 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 CACNA1CQ13936 2221 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 NPIPB15A6NHN6 443 aaPredicted RBP11.24□□□□□ -0.61
CTCFL-218ENST00000608440 A6NIZ1 184 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 ERAL1O75616 437 aaKnown RBP11.24□□□□□ -0.61
CTCFL-218ENST00000608440 JTBO76095 146 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 LCATP04180 440 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 NPPBP16860 134 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 GLIPR1P48060 266 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 NCBP2P52298 156 aaKnown RBP eCLIP11.24□□□□□ -0.61
CTCFL-218ENST00000608440 RAP1BP61224 184 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 C1orf189Q5VU69 101 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 ZNF880Q6PDB4 577 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 SLC39A11Q8N1S5 342 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 PLPP7Q8NBV4 271 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms