RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.1□□□□□ -0.63
CDCA3-212ENST00000604599 PHPT1Q9NRX4 125 aaPredicted RBP11.1□□□□□ -0.63
CDCA3-212ENST00000604599 DNAJB11Q9UBS4 358 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 RAB22AQ9UL26 194 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 HHLA2Q9UM44 414 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 PUS1Q9Y606 427 aaKnown RBP eCLIP11.1□□□□□ -0.63
CDCA3-212ENST00000604599 LOC101059948A0A1B0GTJ6 334 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 K7EPK0 472 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 XKRYO14609 159 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 TAAR5O14804 337 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 TXNDC12O95881 172 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 CEACAM5P06731 702 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 RPL12P30050 165 aaKnown RBP11.1□□□□□ -0.63
CDCA3-212ENST00000604599 RBP2P50120 134 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 ZP2Q05996 745 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 SPEM2Q0P670 501 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 GAMTQ14353 236 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 ZNF574Q6ZN55 896 aaPredicted RBP11.1□□□□□ -0.63
CDCA3-212ENST00000604599 CATSPERDQ86XM0 798 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 FAM71E2Q8N5Q1 922 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 PHOSPHO2Q8TCD6 241 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 ANKRD9Q96BM1 317 aaPredicted RBP11.1□□□□□ -0.63
CDCA3-212ENST00000604599 ZNF524Q96C55 264 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 SRMSQ9H3Y6 488 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 LMAN1LQ9HAT1 526 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 MRPL22Q9NWU5 206 aaKnown RBP11.1□□□□□ -0.63
CDCA3-212ENST00000604599 GPR132Q9UNW8 380 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 MEGF11A6BM72 1044 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 SLC16A7O60669 478 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 APBB3O95704 486 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 PVRP15151 417 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 BTF3P20290 206 aaKnown RBP11.09□□□□□ -0.63
CDCA3-212ENST00000604599 FCGR2CP31995 323 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 TMEM33P57088 247 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 RHEBQ15382 184 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 SURF2Q15527 256 aaPredicted RBP11.09□□□□□ -0.63
CDCA3-212ENST00000604599 C1orf100Q5SVJ3 147 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 ZNF529Q6P280 563 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 LILRA6Q6PI73 481 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 HEPN1Q6WQI6 88 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 COX15Q7KZN9 410 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 JSRP1Q96MG2 331 aaPredicted RBP11.09□□□□□ -0.63
CDCA3-212ENST00000604599 ASB16Q96NS5 453 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 ABHD6Q9BV23 337 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 SCRT1Q9BWW7 348 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 LYRM4Q9HD34 91 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 KCNJ16Q9NPI9 418 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 SERGEFQ9UGK8 458 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 HDGFL3Q9Y3E1 203 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 CDH23Q9H251 3354 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 SLC31A2O15432 143 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 FOXS1O43638 330 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 VSIG8P0DPA2 414 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 DRD3P35462 400 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 GNALP38405 381 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 RAP1AP62834 184 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 PDGFRLQ15198 375 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 RSU1Q15404 277 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 CD226Q15762 336 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 TOMM34Q15785 309 aaPredicted RBP11.09□□□□□ -0.63
CDCA3-212ENST00000604599 C14orf28Q4W4Y0 310 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 GFI1BQ5VTD9 330 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 SPNS3Q6ZMD2 512 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 ATG4DQ86TL0 474 aaPredicted RBP11.09□□□□□ -0.63
CDCA3-212ENST00000604599 UBAC2Q8NBM4 344 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 OR52N4Q8NGI2 321 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 LYPD6BQ8NI32 183 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 PARPBPQ9NWS1 579 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 PPP4R1LQ9P1A2 415 aa11.09□□□□□ -0.63
CDCA3-212ENST00000604599 OTOL1A6NHN0 477 aaPredicted RBP11.08□□□□□ -0.63
CDCA3-212ENST00000604599 H0YGG7 62 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 MPZL1O95297 269 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 HIST1H1BP16401 226 aaKnown RBP11.08□□□□□ -0.63
CDCA3-212ENST00000604599 ZNF708P17019 499 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 WASP42768 502 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 ZNF84P51523 738 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 ARF3P61204 181 aaPredicted RBP11.08□□□□□ -0.63
CDCA3-212ENST00000604599 SSX2Q16385 188 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 LCN10Q6JVE6 187 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 C1QL4Q86Z23 238 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 PNLDC1Q8NA58 520 aaKnown RBP11.08□□□□□ -0.63
CDCA3-212ENST00000604599 MR1Q95460 341 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 VSTM2LQ96N03 204 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 LMF2Q9BU23 707 aaKnown RBP11.08□□□□□ -0.63
CDCA3-212ENST00000604599 PTGES2Q9H7Z7 377 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 Q9N2J8 555 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 TBC1D29Q9UFV1 150 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 ZDHHC8Q9ULC8 765 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 MAFFQ9ULX9 164 aa11.08□□□□□ -0.63
CDCA3-212ENST00000604599 ARGFXA6NJG6 315 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 ZNF727A8MUV8 499 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 P2RY10O00398 339 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 JTBO76095 146 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 CAMLGP49069 296 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 ZNF674Q2M3X9 581 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 WBP2NLQ6ICG8 309 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 KCTD18Q6PI47 426 aaPredicted RBP11.08□□□□□ -0.64
CDCA3-212ENST00000604599 HIST2H3AQ71DI3 136 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 KDF1Q8NAX2 398 aaPredicted RBP11.08□□□□□ -0.64
CDCA3-212ENST00000604599 TAAR8Q969N4 342 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms