RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ITGB1BP2Q9UKP3 347 aa11.86□□□□□ -0.51
RNF40-212ENST00000602784 C17orf100A8MU93 164 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 TIMM8AO60220 97 aaPredicted RBP11.85□□□□□ -0.51
RNF40-212ENST00000602784 NDUFS7O75251 213 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 APOL3O95236 402 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 KRT8P05787 483 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 ANXA2P07355 339 aaKnown RBP11.85□□□□□ -0.51
RNF40-212ENST00000602784 CFL1P23528 166 aaKnown RBP11.85□□□□□ -0.51
RNF40-212ENST00000602784 CDK5R2Q13319 367 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 ZNF829Q3KNS6 432 aaPredicted RBP11.85□□□□□ -0.51
RNF40-212ENST00000602784 GLYATL3Q5SZD4 288 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 PLEKHG7Q6ZR37 379 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 FAM57BQ71RH2 274 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 PGAP1Q75T13 922 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 THAP5Q7Z6K1 395 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 KRTAP1-3Q8IUG1 177 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 RFLNBQ8N5W9 214 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 CNIH3Q8TBE1 160 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 SORCS2Q96PQ0 1159 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 DIRC2Q96SL1 478 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 OR10A2Q9H208 303 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 AMBNQ9NP70 447 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 INPP5EQ9NRR6 644 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 MRM2Q9UI43 246 aaKnown RBP11.85□□□□□ -0.51
RNF40-212ENST00000602784 ZNF391Q9UJN7 358 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 IKZF2Q9UKS7 526 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 ZDHHC8Q9ULC8 765 aa11.85□□□□□ -0.51
RNF40-212ENST00000602784 TMEM269A0A1B0GVZ9 245 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 A0A1B0GWJ7 208 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 DAPL1A0PJW8 107 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 IRGMA1A4Y4 181 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 C5orf63A6NC05 138 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 METTL15A6NJ78 407 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 IQCF6A8MYZ5 107 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 PSMD9O00233 223 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 SRSF10O75494 262 aaKnown RBP11.84□□□□□ -0.51
RNF40-212ENST00000602784 IGHA1P01876 353 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 SLC2A1P11166 492 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 NAT2P11245 290 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 VHLP40337 213 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 ZNF81P51508 661 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 DSCR9P59020 149 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 ZNF85Q03923 595 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 ZNF92Q03936 586 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 SMN1Q16637 294 aaKnown RBP11.84□□□□□ -0.51
RNF40-212ENST00000602784 ALKBH6Q3KRA9 238 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 FAM209AQ5JX71 171 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 Q5PR19 223 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 C6orf52Q5T4I8 152 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 OR2T2Q6IF00 324 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 DNM1P46Q6ZS02 220 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 SSX6Q7RTT6 188 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 MRPL21Q7Z2W9 205 aaKnown RBP11.84□□□□□ -0.51
RNF40-212ENST00000602784 ZCCHC24Q8N2G6 241 aaKnown RBP11.84□□□□□ -0.51
RNF40-212ENST00000602784 OR8G5Q8NG78 346 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 SGK3Q96BR1 496 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 MRPL48Q96GC5 212 aaKnown RBP11.84□□□□□ -0.51
RNF40-212ENST00000602784 TBX5Q99593 518 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 JAM3Q9BX67 310 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 FGF20Q9NP95 211 aaPredicted RBP11.84□□□□□ -0.51
RNF40-212ENST00000602784 MYOZ1Q9NP98 299 aaPredicted RBP11.84□□□□□ -0.51
RNF40-212ENST00000602784 PLCXD1Q9NUJ7 323 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 FAM206AQ9NX38 181 aa11.84□□□□□ -0.51
RNF40-212ENST00000602784 A0A0U1RQV5 110 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 TBX1O43435 398 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 TACSTD2P09758 323 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 ANOS1P23352 680 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 DCKP27707 260 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 DDOSTP39656 456 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 CSNK2BP67870 215 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 MRPS11P82912 194 aaKnown RBP11.83□□□□□ -0.52
RNF40-212ENST00000602784 TIGD6Q17RP2 521 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 CDONQ4KMG0 1287 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 IZUMO2Q6UXV1 221 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 OR13G1Q8NGZ3 307 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 OR2AE1Q8NHA4 323 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 REEP6Q96HR9 211 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 PGAM5Q96HS1 289 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 MOB1AQ9H8S9 216 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 ZNF319Q9P2F9 582 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 NUFIP1Q9UHK0 495 aaKnown RBP11.83□□□□□ -0.52
RNF40-212ENST00000602784 N6AMT1Q9Y5N5 214 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 R4GMQ9 66 aa11.83□□□□□ -0.52
RNF40-212ENST00000602784 ZSCAN5BA6NJL1 495 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 CD300LBA8K4G0 201 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 SSX4O60224 188 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 FAM20BO75063 409 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 CD55P08174 381 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 CSF3P09919 207 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 MYF6P23409 242 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 ACTA2P62736 377 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 ACTG2P63267 376 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 FAM3AP98173 230 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 GALEQ14376 348 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 LIPNQ5VXI9 398 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 LAIR2Q6ISS4 152 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 Q6ZR03 302 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 YIPF7Q8N8F6 280 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 OR8B12Q8NGG6 310 aa11.82□□□□□ -0.52
RNF40-212ENST00000602784 OR52I1Q8NGK6 324 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms