RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 CIB2O75838 187 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 TGFAP01135 160 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 SPARCP09486 303 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 SELEP16581 610 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 ZNF16P17020 682 aaPredicted RBP7.41□□□□□ -1.22
SSBP4-208ENST00000600628 IGFBP5P24593 272 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 PMELP40967 661 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 GPR6P46095 362 aaPredicted RBP7.41□□□□□ -1.22
SSBP4-208ENST00000600628 FAM3AP98173 230 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 MAB21L1Q13394 359 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 APOFQ13790 326 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 OR8B8Q15620 311 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 TSTQ16762 297 aaKnown RBP7.41□□□□□ -1.22
SSBP4-208ENST00000600628 TUSC1Q2TAM9 212 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 GLYATL3Q5SZD4 288 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 ZNF684Q5T5D7 378 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 NXNL2Q5VZ03 156 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 FAM166AQ6J272 317 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 MEPCEQ7L2J0 689 aaKnown RBP7.41□□□□□ -1.22
SSBP4-208ENST00000600628 SLC16A9Q7RTY1 509 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 ERI1Q8IV48 349 aaKnown RBP7.41□□□□□ -1.22
SSBP4-208ENST00000600628 PLPP7Q8NBV4 271 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 TMEM163Q8TC26 289 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 ITFG2Q969R8 447 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 SGK3Q96BR1 496 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 HRASLS5Q96KN8 279 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 OR2V2Q96R30 315 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 RBM4BQ9BQ04 359 aaKnown RBP7.41□□□□□ -1.22
SSBP4-208ENST00000600628 EGLN1Q9GZT9 426 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 OR51V1Q9H2C8 321 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 SEMA6AQ9H2E6 1030 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 OPA3Q9H6K4 179 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 NIPAL2Q9H841 368 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 TVP23BQ9NYZ1 205 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 PTTG3PQ9NZH4 202 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 CDC42EP3Q9UKI2 254 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 WIPI2Q9Y4P8 454 aa7.41□□□□□ -1.22
SSBP4-208ENST00000600628 hCG_38984A0A1B0GV85 526 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 ACOD1A6NK06 481 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 F5H0A9 414 aaPredicted RBP7.4□□□□□ -1.22
SSBP4-208ENST00000600628 H0YL77 283 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 TMEM178BH3BS89 294 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 J3QRE1 110 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 IFNL4K9M1U5 179 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 M0R129 80 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 DLGAP1O14490 977 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 CDC14BO60729 498 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 IGHV2-5P01817 119 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 APOC1P02654 83 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 LCATP04180 440 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 LYNP07948 512 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 FAM157CP0CG43 387 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 GABRB1P18505 474 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 TNFRSF1AP19438 455 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 THBS2P35442 1172 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 DDOSTP39656 456 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 SLC15A1P46059 708 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 ALDH3A2P51648 485 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 DVL1P1P54792 670 aaPredicted RBP7.4□□□□□ -1.22
SSBP4-208ENST00000600628 ISL1P61371 349 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 TNFAIP6P98066 277 aaPredicted RBP7.4□□□□□ -1.22
SSBP4-208ENST00000600628 HNRNPA0Q13151 305 aaKnown RBP7.4□□□□□ -1.22
SSBP4-208ENST00000600628 EIF2B1Q14232 305 aaKnown RBP7.4□□□□□ -1.22
SSBP4-208ENST00000600628 HFEQ30201 348 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 PGAP1Q75T13 922 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 BCDIN3DQ7Z5W3 292 aaKnown RBP7.4□□□□□ -1.22
SSBP4-208ENST00000600628 LRRC28Q86X40 367 aaPredicted RBP7.4□□□□□ -1.22
SSBP4-208ENST00000600628 KLBQ86Z14 1044 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 LINC01356Q8N9X3 169 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 OR2Z1Q8NG97 314 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 OR52H1Q8NGJ2 320 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 OR6N2Q8NGY6 317 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 OR2AE1Q8NHA4 323 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 ITLN1Q8WWA0 313 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 RNF166Q96A37 237 aaPredicted RBP7.4□□□□□ -1.22
SSBP4-208ENST00000600628 DACT3Q96B18 629 aaPredicted RBP7.4□□□□□ -1.22
SSBP4-208ENST00000600628 MEGF10Q96KG7 1140 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 ZNF582Q96NG8 517 aaPredicted RBP7.4□□□□□ -1.22
SSBP4-208ENST00000600628 COPS4Q9BT78 406 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 BEX2Q9BXY8 128 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 ADGRL4Q9HBW9 690 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 S100A14Q9HCY8 104 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 DECR2Q9NUI1 292 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 FAM206AQ9NX38 181 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 MRPL15Q9P015 296 aaKnown RBP7.4□□□□□ -1.22
SSBP4-208ENST00000600628 KIF17Q9P2E2 1029 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 LPAR3Q9UBY5 353 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 KCNS2Q9ULS6 477 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 COPS3Q9UNS2 423 aa7.4□□□□□ -1.22
SSBP4-208ENST00000600628 PPIAL4EA0A075B759 164 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 PPIAL4CA0A0B4J2A2 164 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 A0A0U1RQV5 110 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 SLC22A31A6NKX4 558 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 B4DSR2 109 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 FAM157AC9JC47 383 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 CLDN25C9JDP6 229 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 PPIAL4DF5H284 164 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 EI24O14681 340 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 TNFRSF13BO14836 293 aaPredicted RBP7.39□□□□□ -1.23
SSBP4-208ENST00000600628 TPD52L2O43399 206 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms