RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 CDCA4Q9BXL8 241 aa17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 LIME1Q9H400 295 aa17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 CHCHD3Q9NX63 227 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 OR52A1Q9UKL2 312 aa17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 GTF2A1LQ9UNN4 478 aa17.17■□□□□ 0.34
SHKBP1-222ENST00000600320 ATE1O95260 518 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 LALBAP00709 142 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 TTRP02766 147 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 SOD3P08294 240 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 TACSTD2P09758 323 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 DANCRP0C864 163 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 ZNF250P15622 560 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 EEF1B2P24534 225 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 SERPINF1P36955 418 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 KIR3DL2P43630 455 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 GTF2A1P52655 376 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 NANOS3P60323 173 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 ALKBH6Q3KRA9 238 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 ZNF718Q3SXZ3 478 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 WDR38Q5JTN6 314 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 XAF1Q6GPH4 301 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 TMPRSS11AQ6ZMR5 421 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 PRSS48Q7RTY5 328 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 KLBQ86Z14 1044 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 PRSS35Q8N3Z0 413 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 NANOGP1Q8N7R0 232 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 OR52H1Q8NGJ2 320 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 OR5L1Q8NGL2 311 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 GATAD2BQ8WXI9 593 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 CMBLQ96DG6 245 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 LYZL4Q96KX0 146 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 COG8Q96MW5 612 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 CCDC90BQ9GZT6 254 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 OR10A2Q9H208 303 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 SP140LQ9H930 580 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 NUFIP1Q9UHK0 495 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 SNX5Q9Y5X3 404 aa17.16■□□□□ 0.34
SHKBP1-222ENST00000600320 ACOD1A6NK06 481 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 CD8AP01732 235 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 MT-ND5P03915 603 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 MAP2K4P45985 399 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 PSG7Q13046 419 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 GK2Q14410 553 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 MBNL2Q5VZF2 373 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 FDX2Q6P4F2 183 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 FBXW12Q6X9E4 464 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 C1orf174Q8IYL3 243 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 ELMOD2Q8IZ81 293 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 FBXL14Q8N1E6 418 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 MUC15Q8N387 334 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 OR2G2Q8NGZ5 317 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 SYNPRQ8TBG9 265 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 SPSB4Q96A44 273 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 MYCBPQ99417 103 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 PLK3Q9H4B4 646 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 MOB1AQ9H8S9 216 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 DUSP13Q9UII6 198 aa17.15■□□□□ 0.34
SHKBP1-222ENST00000600320 IGLV3-9A0A075B6K5 115 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 NBPF19A0A087WUL8 3843 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 TRIM64A6NGJ6 449 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 MYL12BO14950 172 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 XRCC2O43543 280 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 IGLV3-1P01715 115 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 TUBG1P23258 451 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 GBX2P52951 348 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 MALLQ13021 153 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 EFNB3Q15768 340 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 TIGD6Q17RP2 521 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 GFOD2Q3B7J2 385 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 BCL2L15Q5TBC7 163 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 DTX2Q86UW9 622 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 EGFL6Q8IUX8 553 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 HAVCR1Q96D42 359 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 REEP6Q96HR9 211 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 OR5M11Q96RB7 305 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 REPIN1Q9BWE0 567 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 TUBG2Q9NRH3 451 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 FRRS1LQ9P0K9 344 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 ST6GALNAC2Q9UJ37 374 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 PURGQ9UJV8 347 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 ERGIC3Q9Y282 383 aa17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 LSM2Q9Y333 95 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 SIRT4Q9Y6E7 314 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-222ENST00000600320 hCG_38984A0A1B0GV85 526 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 VSTM5A8MXK1 200 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 H3BSA7 217 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 RAC2P15153 192 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 GCH1P30793 250 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 CHN2P52757 468 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 WNT4P56705 351 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 ALKBH1Q13686 389 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 SWI5Q1ZZU3 235 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 KCTD21Q4G0X4 260 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 OR2T2Q6IF00 324 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 C11orf71Q6IPW1 123 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 C20orf204Q6ZNR8 217 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 MRPL21Q7Z2W9 205 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 ZFP41Q8N8Y5 198 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 IGFBPL1Q8WX77 278 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 TRAF4Q9BUZ4 470 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms