RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 S100A14Q9HCY8 104 aa19.29■□□□□ 0.68
IRF3-220ENST00000598108 YLPM1P49750 1951 aaKnown RBP19.29■□□□□ 0.68
IRF3-220ENST00000598108 A0A1B0GWJ7 208 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 CLDN25C9JDP6 229 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 CRLF1O75462 422 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 HLA-DPB1P04440 258 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 LYNP07948 512 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 MRPL3P09001 348 aaKnown RBP19.28■□□□□ 0.68
IRF3-220ENST00000598108 SELEP16581 610 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 ALOX5APP20292 161 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 LMO4P61968 165 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 RHOUQ7L0Q8 258 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 SLC16A9Q7RTY1 509 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 MRPL21Q7Z2W9 205 aaKnown RBP19.28■□□□□ 0.68
IRF3-220ENST00000598108 TMEM163Q8TC26 289 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 C1orf159Q96HA4 380 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 RAB3IPQ96QF0 476 aaPredicted RBP19.28■□□□□ 0.68
IRF3-220ENST00000598108 OR2V2Q96R30 315 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 PRRG3Q9BZD7 231 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 TOR3AQ9H497 397 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 TMEM100Q9NV29 134 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 DNAJC27Q9NZQ0 273 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 ZNF319Q9P2F9 582 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 IL19Q9UHD0 177 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 ENOPH1Q9UHY7 261 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 WIPI2Q9Y4P8 454 aa19.28■□□□□ 0.68
IRF3-220ENST00000598108 CD300LBA8K4G0 201 aa19.27■□□□□ 0.68
IRF3-220ENST00000598108 TGFAP01135 160 aa19.27■□□□□ 0.68
IRF3-220ENST00000598108 ALPLP05186 524 aa19.27■□□□□ 0.68
IRF3-220ENST00000598108 H2BFMP0C1H6 154 aa19.27■□□□□ 0.68
IRF3-220ENST00000598108 HSD11B1P28845 292 aa19.27■□□□□ 0.68
IRF3-220ENST00000598108 ZNF121P58317 390 aaPredicted RBP19.27■□□□□ 0.68
IRF3-220ENST00000598108 MEPCEQ7L2J0 689 aaKnown RBP19.27■□□□□ 0.68
IRF3-220ENST00000598108 SPRYD4Q8WW59 207 aaPredicted RBP19.27■□□□□ 0.68
IRF3-220ENST00000598108 SGK3Q96BR1 496 aa19.27■□□□□ 0.68
IRF3-220ENST00000598108 YIPF3Q9GZM5 350 aa19.27■□□□□ 0.68
IRF3-220ENST00000598108 IGHV3-64DA0A0J9YX35 117 aa19.26■□□□□ 0.67
IRF3-220ENST00000598108 F5H5P2 479 aa19.26■□□□□ 0.67
IRF3-220ENST00000598108 EI24O14681 340 aa19.26■□□□□ 0.67
IRF3-220ENST00000598108 LMX1BO60663 402 aa19.26■□□□□ 0.67
IRF3-220ENST00000598108 ANXA2P07355 339 aaKnown RBP19.26■□□□□ 0.67
IRF3-220ENST00000598108 FAM57BQ71RH2 274 aa19.26■□□□□ 0.67
IRF3-220ENST00000598108 C10orf67Q8IYJ2 551 aa19.26■□□□□ 0.67
IRF3-220ENST00000598108 SPSB4Q96A44 273 aa19.26■□□□□ 0.67
IRF3-220ENST00000598108 MEGF10Q96KG7 1140 aa19.26■□□□□ 0.67
IRF3-220ENST00000598108 BRD7Q9NPI1 651 aa19.26■□□□□ 0.67
IRF3-220ENST00000598108 TMEM106BQ9NUM4 274 aa19.26■□□□□ 0.67
IRF3-220ENST00000598108 COPS3Q9UNS2 423 aa19.26■□□□□ 0.67
IRF3-220ENST00000598108 PRR32B1ATL7 298 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 FAM157AC9JC47 383 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 TBX1O43435 398 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 TNFRSF1AP19438 455 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 CDH15P55291 814 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 NXNL2Q5VZ03 156 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 FAM166AQ6J272 317 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 LRRN1Q6UXK5 716 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 CBR4Q8N4T8 237 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 LINC01356Q8N9X3 169 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 RAB1CQ92928 201 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 GCM1Q9NP62 436 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 USE1Q9NZ43 259 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 H2AFY2Q9P0M6 372 aaPredicted RBP19.25■□□□□ 0.67
IRF3-220ENST00000598108 LAMP5Q9UJQ1 280 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 PPP1R3CQ9UQK1 317 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 JMJD1CQ15652 2540 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 ABCA2Q9BZC7 2435 aa19.25■□□□□ 0.67
IRF3-220ENST00000598108 GGT3PA6NGU5 568 aa19.24■□□□□ 0.67
IRF3-220ENST00000598108 CA6P23280 308 aa19.24■□□□□ 0.67
IRF3-220ENST00000598108 LCN1P1Q5VSP4 162 aa19.24■□□□□ 0.67
IRF3-220ENST00000598108 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.24■□□□□ 0.67
IRF3-220ENST00000598108 UBE2FQ969M7 185 aa19.24■□□□□ 0.67
IRF3-220ENST00000598108 TIMD4Q96H15 378 aa19.24■□□□□ 0.67
IRF3-220ENST00000598108 SVEP1Q4LDE5 3571 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 PSMD9O00233 223 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 XRCC2O43543 280 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 APOC1P02654 83 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 PMELP40967 661 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 FAM3AP98173 230 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 SLC3A1Q07837 685 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 MAB21L1Q13394 359 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 ZIK1Q3SY52 487 aaPredicted RBP19.23■□□□□ 0.67
IRF3-220ENST00000598108 ZNF771Q7L3S4 317 aaPredicted RBP19.23■□□□□ 0.67
IRF3-220ENST00000598108 PRIMA1Q86XR5 153 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 OR56B2PQ8NGI1 322 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 ZNF420Q8TAQ5 688 aaPredicted RBP19.23■□□□□ 0.67
IRF3-220ENST00000598108 SIGLEC11Q96RL6 698 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 ADGRL4Q9HBW9 690 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 KCNS2Q9ULS6 477 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 LRP12Q9Y561 859 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 NPTNQ9Y639 398 aa19.23■□□□□ 0.67
IRF3-220ENST00000598108 MALRD1Q5VYJ5 2156 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 SLC22A31A6NKX4 558 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 E9PQ18 207 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 SRP9P49458 86 aaKnown RBP19.22■□□□□ 0.67
IRF3-220ENST00000598108 MMP16P51512 607 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 ALDH3A2P51648 485 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 KRT77Q7Z794 578 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 PQLC1Q8N2U9 271 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 RFLNBQ8N5W9 214 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 OR52H1Q8NGJ2 320 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms