RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 ZNF92Q03936 586 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 POU4F2Q12837 409 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 MALLQ13021 153 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 OR8G1Q15617 311 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 FIP1L1Q6UN15 594 aaKnown RBP13.35□□□□□ -0.27
LIM2-202ENST00000596399 OR11L1Q8NGX0 322 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 OR2AJ1Q8NGZ0 328 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 SPRYD4Q8WW59 207 aaPredicted RBP13.35□□□□□ -0.27
LIM2-202ENST00000596399 CHIAQ9BZP6 476 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 NSRP1Q9H0G5 558 aaKnown RBP13.35□□□□□ -0.27
LIM2-202ENST00000596399 PRDM13Q9H4Q3 707 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 PDP1Q9P0J1 537 aaPredicted RBP13.35□□□□□ -0.27
LIM2-202ENST00000596399 SAMD4AQ9UPU9 718 aaKnown RBP13.35□□□□□ -0.27
LIM2-202ENST00000596399 CD300LBA8K4G0 201 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 SRRM5B3KS81 715 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 M0R135 149 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 OR10H3O60404 316 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 NOS3P29474 1203 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 CFHR2P36980 270 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.34□□□□□ -0.27
LIM2-202ENST00000596399 ECH1Q13011 328 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 GPR157Q5UAW9 335 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 Q6YL49 198 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 ZNF826PQ6ZT77 177 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 MRPL21Q7Z2W9 205 aaKnown RBP13.34□□□□□ -0.27
LIM2-202ENST00000596399 LNX2Q8N448 690 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 CELF2-AS1Q8N7Q2 184 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 CYB561A3Q8NBI2 242 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 OR51L1Q8NGJ5 315 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 ZNF799Q96GE5 643 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 PYURFQ96I23 114 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 TBX15Q96SF7 602 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 SLITRK2Q9H156 845 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 EGLN3Q9H6Z9 239 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 KRCC1Q9NPI7 259 aaPredicted RBP13.34□□□□□ -0.27
LIM2-202ENST00000596399 RNF7Q9UBF6 113 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 N6AMT1Q9Y5N5 214 aa13.34□□□□□ -0.27
LIM2-202ENST00000596399 CENPVL3A0A0U1RRI6 287 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 TNFRSF13BO14836 293 aaPredicted RBP13.33□□□□□ -0.28
LIM2-202ENST00000596399 ENSAO43768 121 aaKnown RBP13.33□□□□□ -0.28
LIM2-202ENST00000596399 MMP9P14780 707 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 TPTEP56180 551 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 KRTAP10-3P60369 221 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 ELF3P78545 371 aaPredicted RBP13.33□□□□□ -0.28
LIM2-202ENST00000596399 OR8B8Q15620 311 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 SLC36A3Q495N2 470 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 PDLIM3Q53GG5 364 aaPredicted RBP13.33□□□□□ -0.28
LIM2-202ENST00000596399 GLYATL3Q5SZD4 288 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 FGFRL1Q8N441 504 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 WFDC12Q8WWY7 111 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 ERGIC1Q969X5 290 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 ADAT1Q9BUB4 502 aaKnown RBP13.33□□□□□ -0.28
LIM2-202ENST00000596399 MYLK2Q9H1R3 596 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 FN3KRPQ9HA64 309 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 SPAG4Q9NPE6 437 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 C1orf123Q9NWV4 160 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 C1RLQ9NZP8 487 aa13.33□□□□□ -0.28
LIM2-202ENST00000596399 IGHV3OR15-7A0A075B7D8 119 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 ZNF879B4DU55 563 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 LGALS8O00214 317 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 NDUFAB1O14561 156 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 ADAM20O43506 726 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 TOX4O94842 621 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 KNG1P01042 644 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 GYPAP02724 150 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 GRPP07492 148 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 MELTFP08582 738 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 SLC2A1P11166 492 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 RRM2P31350 389 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 GSSP48637 474 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 RAG2P55895 527 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 MIDNQ504T8 468 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 PGBD2Q6P3X8 592 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 ZNF620Q6ZNG0 422 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 PDZD9Q8IXQ8 264 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 DDOQ99489 341 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 ELAC2Q9BQ52 826 aaKnown RBP13.32□□□□□ -0.28
LIM2-202ENST00000596399 GORASP2Q9H8Y8 452 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 ERVK-18Q9QC07 812 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 MMP24Q9Y5R2 645 aa13.32□□□□□ -0.28
LIM2-202ENST00000596399 A0A1B0GW55 424 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 GGT3PA6NGU5 568 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 DUX4L2P0CJ85 424 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 DUX4L3P0CJ86 424 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 DUX4L4P0CJ87 422 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 DUX4L5P0CJ88 424 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 DUX4L6P0CJ89 424 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 DUX4L7P0CJ90 424 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 ZNF823P16415 610 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 PRKXP51817 358 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 SMIM11AP58511 58 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 ARF6P62330 175 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 PRB3Q04118 309 aaPredicted RBP13.31□□□□□ -0.28
LIM2-202ENST00000596399 ZNF362Q5T0B9 420 aaPredicted RBP13.31□□□□□ -0.28
LIM2-202ENST00000596399 DUX4L9Q6RFH8 374 aaPredicted RBP13.31□□□□□ -0.28
LIM2-202ENST00000596399 PROKR2Q8NFJ6 384 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 OR9Q1Q8NGQ5 310 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 LHX4Q969G2 390 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 CMTM5Q96DZ9 223 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 PPP1R3EQ9H7J1 279 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms