RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CDKN1AP38936 164 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 ALDH3B1P43353 468 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 KIR3DL2P43630 455 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 HSPA13P48723 471 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 GTF2A1P52655 376 aaPredicted RBP9.02□□□□□ -0.97
LIG1-210ENST00000596332 PSMA6P60900 246 aaKnown RBP9.02□□□□□ -0.97
LIG1-210ENST00000596332 FAM3AP98173 230 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 ST3GAL4Q11206 333 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 IRF3Q14653 427 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 TESK1Q15569 626 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 AGAP6Q5VW22 663 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 XAF1Q6GPH4 301 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 FDX2Q6P4F2 183 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 KCTD18Q6PI47 426 aaPredicted RBP9.02□□□□□ -0.97
LIG1-210ENST00000596332 DNM1P46Q6ZS02 220 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 FAM57BQ71RH2 274 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 CATSPERDQ86XM0 798 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 C1orf174Q8IYL3 243 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 FBXL14Q8N1E6 418 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 ZNF283Q8N7M2 679 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 PLPP7Q8NBV4 271 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 BPIFB6Q8NFQ5 453 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 SYNPRQ8TBG9 265 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 RPS4Y2Q8TD47 263 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 KCNS3Q9BQ31 491 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 MROQ9BYG7 248 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 NIPAL2Q9H841 368 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 TUBG2Q9NRH3 451 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 ACOXLQ9NUZ1 547 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 CNOT2Q9NZN8 540 aaKnown RBP9.02□□□□□ -0.97
LIG1-210ENST00000596332 PURGQ9UJV8 347 aaKnown RBP9.02□□□□□ -0.97
LIG1-210ENST00000596332 SLC22A13Q9Y226 551 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 SPEF1Q9Y4P9 236 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 SIRT4Q9Y6E7 314 aaPredicted RBP9.02□□□□□ -0.97
LIG1-210ENST00000596332 DSCAMO60469 2012 aa9.02□□□□□ -0.97
LIG1-210ENST00000596332 hCG_38984A0A1B0GV85 526 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 TMEM269A0A1B0GVZ9 245 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 DAPL1A0PJW8 107 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 TRIM64A6NGJ6 449 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 ZSCAN5BA6NJL1 495 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 ACOD1A6NK06 481 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 H7C417 338 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 PHYHO14832 338 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 FADS2O95864 444 aaKnown RBP9.01□□□□□ -0.97
LIG1-210ENST00000596332 IGHV4-39P01824 125 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 ADH4P08319 380 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 CCDC159P0C7I6 412 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 ACKR3P25106 362 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 DCKP27707 260 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 PSMB10P40306 273 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 RPS23P62266 143 aaKnown RBP9.01□□□□□ -0.97
LIG1-210ENST00000596332 HNRNPA0Q13151 305 aaKnown RBP9.01□□□□□ -0.97
LIG1-210ENST00000596332 DEFB113Q30KQ7 82 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 ZNF718Q3SXZ3 478 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 OR2G6Q5TZ20 316 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 RNLSQ5VYX0 342 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 OR2T2Q6IF00 324 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 ARL9Q6T311 187 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 CDH24Q86UP0 819 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 EGFL6Q8IUX8 553 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 ELMOD2Q8IZ81 293 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 NINJ1Q92982 152 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 CNBD2Q96M20 576 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 SORCS2Q96PQ0 1159 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 ALG8Q9BVK2 526 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 CACNG6Q9BXT2 260 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 PBOV1Q9GZY1 135 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 CXXC4Q9H2H0 198 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 BRD7Q9NPI1 651 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 FRRS1LQ9P0K9 344 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 TAAR3PQ9P1P4 343 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 ERVK-18Q9QC07 812 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 NUFIP1Q9UHK0 495 aaKnown RBP9.01□□□□□ -0.97
LIG1-210ENST00000596332 DUSP13Q9UII6 198 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 IKZF2Q9UKS7 526 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 PCDHGB1Q9Y5G3 927 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 R4GMQ9 66 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 MAP1AP78559 2803 aaPredicted RBP9.01□□□□□ -0.97
LIG1-210ENST00000596332 USF3Q68DE3 2245 aa9.01□□□□□ -0.97
LIG1-210ENST00000596332 ANKRD17O75179 2603 aaKnown RBP9□□□□□ -0.97
LIG1-210ENST00000596332 A0A0U1RQV5 110 aa9□□□□□ -0.97
LIG1-210ENST00000596332 SNTNA6NMZ2 147 aa9□□□□□ -0.97
LIG1-210ENST00000596332 OR4C45A6NMZ5 311 aa9□□□□□ -0.97
LIG1-210ENST00000596332 IQCF6A8MYZ5 107 aa9□□□□□ -0.97
LIG1-210ENST00000596332 H0YL77 283 aa9□□□□□ -0.97
LIG1-210ENST00000596332 NCR1O76036 304 aa9□□□□□ -0.97
LIG1-210ENST00000596332 LY6HO94772 140 aa9□□□□□ -0.97
LIG1-210ENST00000596332 CDK1P06493 297 aa9□□□□□ -0.97
LIG1-210ENST00000596332 HSD11B1P28845 292 aa9□□□□□ -0.97
LIG1-210ENST00000596332 ATP6V1E1P36543 226 aa9□□□□□ -0.97
LIG1-210ENST00000596332 RIDAP52758 137 aaKnown RBP9□□□□□ -0.97
LIG1-210ENST00000596332 KLF3P57682 345 aaPredicted RBP9□□□□□ -0.97
LIG1-210ENST00000596332 ACTC1P68032 377 aa9□□□□□ -0.97
LIG1-210ENST00000596332 ACTA1P68133 377 aa9□□□□□ -0.97
LIG1-210ENST00000596332 TAF13Q15543 124 aa9□□□□□ -0.97
LIG1-210ENST00000596332 OR8B8Q15620 311 aa9□□□□□ -0.97
LIG1-210ENST00000596332 WDR38Q5JTN6 314 aa9□□□□□ -0.97
LIG1-210ENST00000596332 KCTD20Q7Z5Y7 419 aa9□□□□□ -0.97
LIG1-210ENST00000596332 HIST2H2ABQ8IUE6 130 aaPredicted RBP9□□□□□ -0.97
LIG1-210ENST00000596332 SYS1Q8N2H4 156 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms