RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 CD200P41217 278 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 SLC6A9P48067 706 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 MMP16P51512 607 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 PRKXP51817 358 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 ESRRGP62508 458 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 EIF2B1Q14232 305 aaKnown RBP10.99□□□□□ -0.65
USE1-207ENST00000596136 SLC35D3Q5M8T2 416 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 PLBD1Q6P4A8 553 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 ASRGL1Q7L266 308 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 PRSS45Q7RTY3 260 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 ERI1Q8IV48 349 aaKnown RBP10.99□□□□□ -0.65
USE1-207ENST00000596136 CPOQ8IVL8 374 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 BHLHE23Q8NDY6 225 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 OR10AD1Q8NGE0 317 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 OR6N2Q8NGY6 317 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 OTOSQ8NHW6 89 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 ERGIC1Q969X5 290 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 GAL3ST1Q99999 423 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 SLC22A4Q9H015 551 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 OR51V1Q9H2C8 321 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 PAPOLBQ9NRJ5 636 aaKnown RBP10.99□□□□□ -0.65
USE1-207ENST00000596136 CENPMQ9NSP4 180 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 POLR3KQ9Y2Y1 108 aaPredicted RBP10.99□□□□□ -0.65
USE1-207ENST00000596136 AP4S1Q9Y587 144 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 DOCK11Q5JSL3 2073 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 PPIAL4EA0A075B759 164 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 PPIAL4CA0A0B4J2A2 164 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 PPIAL4DF5H284 164 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 F5H5P2 479 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 GMDSO60547 372 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 PPIAL4FP0DN26 164 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 CPT2P23786 658 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 FASP25445 335 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 RAD23AP54725 363 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 BTG1P62324 171 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 EFNB1P98172 346 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 HNRNPA0Q13151 305 aaKnown RBP10.98□□□□□ -0.65
USE1-207ENST00000596136 MAB21L1Q13394 359 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 PTGES3Q15185 160 aaKnown RBP10.98□□□□□ -0.65
USE1-207ENST00000596136 ZMYND11Q15326 602 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 TAF13Q15543 124 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 GLYATL3Q5SZD4 288 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 C1orf146Q5VVC0 180 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 TMEM236Q5W0B7 351 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 KDM4DQ6B0I6 523 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 CXXC5Q7LFL8 322 aaKnown RBP10.98□□□□□ -0.65
USE1-207ENST00000596136 MRPL21Q7Z2W9 205 aaKnown RBP10.98□□□□□ -0.65
USE1-207ENST00000596136 ZNF454Q8N9F8 522 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 OR2AE1Q8NHA4 323 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 Q8TCH9 128 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 OTULINQ96BN8 352 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 ZMYND19Q96E35 227 aaPredicted RBP10.98□□□□□ -0.65
USE1-207ENST00000596136 AMELYQ99218 206 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 TEX12Q9BXU0 123 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 GABARAPL1Q9H0R8 117 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 SP140LQ9H930 580 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 PATZ1Q9HBE1 687 aaKnown RBP10.98□□□□□ -0.65
USE1-207ENST00000596136 LPAR2Q9HBW0 351 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 MRPL15Q9P015 296 aaKnown RBP10.98□□□□□ -0.65
USE1-207ENST00000596136 NOP16Q9Y3C1 178 aaKnown RBP10.98□□□□□ -0.65
USE1-207ENST00000596136 STAB1Q9NY15 2570 aa10.98□□□□□ -0.65
USE1-207ENST00000596136 F5H0A9 414 aaPredicted RBP10.97□□□□□ -0.65
USE1-207ENST00000596136 G3V2T6 193 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 XRCC2O43543 280 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 PNPP00491 289 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 HLA-DPB1P04440 258 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 SBK2P0C263 348 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 FCGR1AP12314 374 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 GATA3P23771 443 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 RBMXP38159 391 aaKnown RBP10.97□□□□□ -0.65
USE1-207ENST00000596136 DDOSTP39656 456 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 MDH2P40926 338 aaKnown RBP10.97□□□□□ -0.65
USE1-207ENST00000596136 PMELP40967 661 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 PRSS12P56730 875 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 SNAPC1Q16533 368 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 C1orf229Q6ZS94 237 aaPredicted RBP10.97□□□□□ -0.65
USE1-207ENST00000596136 KLBQ86Z14 1044 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 SPICQ8N5J4 248 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 PLPP7Q8NBV4 271 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 BBS1Q8NFJ9 593 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 ZNF420Q8TAQ5 688 aaPredicted RBP10.97□□□□□ -0.65
USE1-207ENST00000596136 SPRYD4Q8WW59 207 aaPredicted RBP10.97□□□□□ -0.65
USE1-207ENST00000596136 SGK3Q96BR1 496 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 PLEKHA8Q96JA3 519 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 TEAD3Q99594 435 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 TMEM165Q9HC07 324 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 TVP23BQ9NYZ1 205 aa10.97□□□□□ -0.65
USE1-207ENST00000596136 ISPDA4D126 451 aa10.96□□□□□ -0.65
USE1-207ENST00000596136 J3QLI3 93 aa10.96□□□□□ -0.65
USE1-207ENST00000596136 PHF1O43189 567 aaPredicted RBP10.96□□□□□ -0.65
USE1-207ENST00000596136 SELENOFO60613 162 aa10.96□□□□□ -0.65
USE1-207ENST00000596136 AVPP01185 164 aa10.96□□□□□ -0.65
USE1-207ENST00000596136 LYNP07948 512 aa10.96□□□□□ -0.65
USE1-207ENST00000596136 SLC2A1P11166 492 aa10.96□□□□□ -0.65
USE1-207ENST00000596136 ALOX5APP20292 161 aa10.96□□□□□ -0.65
USE1-207ENST00000596136 CA6P23280 308 aa10.96□□□□□ -0.65
USE1-207ENST00000596136 ZFP36P26651 326 aaKnown RBP10.96□□□□□ -0.65
USE1-207ENST00000596136 CX3CR1P49238 355 aa10.96□□□□□ -0.65
USE1-207ENST00000596136 KLHL12Q53G59 568 aa10.96□□□□□ -0.65
USE1-207ENST00000596136 SLX4IPQ5VYV7 408 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms