RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 ZDHHC8Q9ULC8 765 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 IGHV3-64DA0A0J9YX35 117 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 CD300LBA8K4G0 201 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 PSMD9O00233 223 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 DLGAP1O14490 977 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 TPD52L2O43399 206 aaKnown RBP9.43□□□□□ -0.9
VRK3-210ENST00000596121 PPIHO43447 177 aaKnown RBP9.43□□□□□ -0.9
VRK3-210ENST00000596121 BAG2O95816 211 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 MT-ND5P03915 603 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 LYNP07948 512 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 SELEP16581 610 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 PMELP40967 661 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 GPR6P46095 362 aaPredicted RBP9.43□□□□□ -0.9
VRK3-210ENST00000596121 TMEM33P57088 247 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 ZNF121P58317 390 aaPredicted RBP9.43□□□□□ -0.9
VRK3-210ENST00000596121 GRB2P62993 217 aaKnown RBP9.43□□□□□ -0.9
VRK3-210ENST00000596121 MVKQ03426 396 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 FAM57BQ71RH2 274 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 PGAP1Q75T13 922 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 RHOUQ7L0Q8 258 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 ZNF540Q8NDQ6 660 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 ITLN1Q8WWA0 313 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 PPP1R14AQ96A00 147 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 EME1Q96AY2 570 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 MSI2Q96DH6 328 aaKnown RBP9.43□□□□□ -0.9
VRK3-210ENST00000596121 ELMOD3Q96FG2 381 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 ZNF582Q96NG8 517 aaPredicted RBP9.43□□□□□ -0.9
VRK3-210ENST00000596121 TTTY10Q9BZA0 68 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 YIPF3Q9GZM5 350 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 NARFLQ9H6Q4 476 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 PPP1R3EQ9H7J1 279 aa9.43□□□□□ -0.9
VRK3-210ENST00000596121 CGGBP1Q9UFW8 167 aaPredicted RBP9.43□□□□□ -0.9
VRK3-210ENST00000596121 JMJD1CQ15652 2540 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 F5H5P2 479 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 APOL3O95236 402 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 ANXA2P07355 339 aaKnown RBP9.42□□□□□ -0.9
VRK3-210ENST00000596121 H2BFMP0C1H6 154 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 ZNF16P17020 682 aaPredicted RBP9.42□□□□□ -0.9
VRK3-210ENST00000596121 SLC15A1P46059 708 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 LMO4P61968 165 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 HOXA4Q00056 320 aaPredicted RBP9.42□□□□□ -0.9
VRK3-210ENST00000596121 MALLQ13021 153 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 ZSCAN26Q16670 478 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 C6orf52Q5T4I8 152 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 SSX6Q7RTT6 188 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 C10orf67Q8IYJ2 551 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 OR8J1Q8NGP2 316 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 OR13G1Q8NGZ3 307 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 CLDND2Q8NHS1 167 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 CCL17Q92583 94 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 DVL3Q92997 716 aaPredicted RBP9.42□□□□□ -0.9
VRK3-210ENST00000596121 SPSB4Q96A44 273 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 C1orf159Q96HA4 380 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 HRASLS5Q96KN8 279 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 LYZL4Q96KX0 146 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 OR2V2Q96R30 315 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 DIRC2Q96SL1 478 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 TOR3AQ9H497 397 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 BRD7Q9NPI1 651 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 YAE1D1Q9NRH1 226 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 HAO2Q9NYQ3 351 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 ENOPH1Q9UHY7 261 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 LAMP5Q9UJQ1 280 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 WIPI2Q9Y4P8 454 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 LRP12Q9Y561 859 aa9.42□□□□□ -0.9
VRK3-210ENST00000596121 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.42□□□□□ -0.94e-10■■■■■ 37.9
VRK3-210ENST00000596121 FAM157AC9JC47 383 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 TBX1O43435 398 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 ENTPD6O75354 484 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 SBK2P0C263 348 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 GABRB1P18505 474 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 CA6P23280 308 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 HSD11B1P28845 292 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 HTR1FP30939 366 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 CHN2P52757 468 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 FAM3AP98173 230 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 ROM1Q03395 351 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 MAB21L1Q13394 359 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 ZMAT1Q5H9K5 638 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 LCN1P1Q5VSP4 162 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 CYB5R2Q6BCY4 276 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 ZBTB49Q6ZSB9 765 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 MRPL21Q7Z2W9 205 aaKnown RBP9.41□□□□□ -0.9
VRK3-210ENST00000596121 SLC35F2Q8IXU6 374 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 OR51G2Q8NGK0 314 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 ZNF420Q8TAQ5 688 aaPredicted RBP9.41□□□□□ -0.9
VRK3-210ENST00000596121 FAM81AQ8TBF8 368 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 POM121Q96HA1 1249 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 REEP6Q96HR9 211 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 MEGF10Q96KG7 1140 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 OR8B4Q96RC9 309 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 SIGLEC11Q96RL6 698 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 CNN2Q99439 309 aaKnown RBP9.41□□□□□ -0.9
VRK3-210ENST00000596121 APOL4Q9BPW4 351 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 C9orf16Q9BUW7 83 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 PRRG3Q9BZD7 231 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 EGLN1Q9GZT9 426 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 GCM1Q9NP62 436 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 TMEM100Q9NV29 134 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 H2AFY2Q9P0M6 372 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms