RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 NIPBLQ6KC79 2804 aaeCLIP13.04□□□□□ -0.32
USE1-206ENST00000595101 CHD3Q12873 2000 aaKnown RBP13.04□□□□□ -0.32
USE1-206ENST00000595101 SETD2Q9BYW2 2564 aaPredicted RBP13.04□□□□□ -0.32
USE1-206ENST00000595101 SLC22A31A6NKX4 558 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 TBX1O43435 398 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 MT-ND5P03915 603 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 CSF3P09919 207 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 SLC25A16P16260 332 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 SELEP16581 610 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 GIFP27352 417 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 PEX2P28328 305 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 IL2RGP31785 369 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 CDC42P60953 191 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 LCN1P1Q5VSP4 162 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 PGAP1Q75T13 922 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 SSX6Q7RTT6 188 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 BIVMQ86UB2 503 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 ZNF454Q8N9F8 522 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 OR8G5Q8NG78 346 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 PPP1R14AQ96A00 147 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 SGK3Q96BR1 496 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 ELMOD3Q96FG2 381 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 CNN2Q99439 309 aaKnown RBP13.04□□□□□ -0.32
USE1-206ENST00000595101 TBX5Q99593 518 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 REPIN1Q9BWE0 567 aaKnown RBP13.04□□□□□ -0.32
USE1-206ENST00000595101 YIPF3Q9GZM5 350 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 NARFLQ9H6Q4 476 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 MYOZ1Q9NP98 299 aaPredicted RBP13.04□□□□□ -0.32
USE1-206ENST00000595101 LRP12Q9Y561 859 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 NF1P21359 2839 aa13.04□□□□□ -0.32
USE1-206ENST00000595101 CR1P17927 2039 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 IGHV1-69-2A0A0G2JMI3 117 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 IQCF6A8MYZ5 107 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 NDUFS8O00217 210 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 MLNRO43193 412 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 ENTPD6O75354 484 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 SBK2P0C263 348 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 USF1P22415 310 aaPredicted RBP13.03□□□□□ -0.32
USE1-206ENST00000595101 HTR1FP30939 366 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 CXCR4P61073 352 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 ELF3P78545 371 aaPredicted RBP13.03□□□□□ -0.32
USE1-206ENST00000595101 TNFAIP6P98066 277 aaPredicted RBP13.03□□□□□ -0.32
USE1-206ENST00000595101 MALLQ13021 153 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 GFOD2Q3B7J2 385 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 PCGF3Q3KNV8 242 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 PLEKHG7Q6ZR37 379 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 SLC35F2Q8IXU6 374 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 SLC30A2Q9BRI3 323 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 PPP1R3EQ9H7J1 279 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 CHODLQ9H9P2 273 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 CYSLTR2Q9NS75 346 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 FAM118AQ9NWS6 357 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 NKX1-2Q9UD57 310 aaPredicted RBP13.03□□□□□ -0.32
USE1-206ENST00000595101 GMPPBQ9Y5P6 360 aa13.03□□□□□ -0.32
USE1-206ENST00000595101 ADH4P08319 380 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 LIPAP38571 399 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 CRYBB2P43320 205 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 LOXL1Q08397 574 aaPredicted RBP13.02□□□□□ -0.32
USE1-206ENST00000595101 TMEM249Q2WGJ8 235 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 FAM209AQ5JX71 171 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 RHOUQ7L0Q8 258 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 MRPL21Q7Z2W9 205 aaKnown RBP13.02□□□□□ -0.32
USE1-206ENST00000595101 KRT77Q7Z794 578 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.02□□□□□ -0.32
USE1-206ENST00000595101 GID4Q8IVV7 300 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 ENTHD1Q8IYW4 607 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 ITLN1Q8WWA0 313 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 CCL17Q92583 94 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 DVL3Q92997 716 aaPredicted RBP13.02□□□□□ -0.32
USE1-206ENST00000595101 APOL4Q9BPW4 351 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 IMPAD1Q9NX62 359 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 HAO2Q9NYQ3 351 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 ZDHHC8Q9ULC8 765 aa13.02□□□□□ -0.32
USE1-206ENST00000595101 LOC100130705A0A1B0GUX0 176 aa13.02□□□□□ -0.33
USE1-206ENST00000595101 CD300LBA8K4G0 201 aa13.02□□□□□ -0.33
USE1-206ENST00000595101 F5H5P2 479 aa13.02□□□□□ -0.33
USE1-206ENST00000595101 CLIC3O95833 236 aa13.02□□□□□ -0.33
USE1-206ENST00000595101 NAT1P18440 290 aa13.02□□□□□ -0.33
USE1-206ENST00000595101 GABRB1P18505 474 aa13.02□□□□□ -0.33
USE1-206ENST00000595101 ACHEP22303 614 aa13.02□□□□□ -0.33
USE1-206ENST00000595101 AVPI1Q5T686 147 aa13.02□□□□□ -0.33
USE1-206ENST00000595101 OR2V2Q96R30 315 aa13.02□□□□□ -0.33
USE1-206ENST00000595101 CGGBP1Q9UFW8 167 aaPredicted RBP13.02□□□□□ -0.33
USE1-206ENST00000595101 ABCA1O95477 2261 aa13.02□□□□□ -0.33
USE1-206ENST00000595101 A0A1W2PQL4 384 aaPredicted RBP13.01□□□□□ -0.33
USE1-206ENST00000595101 PPIHO43447 177 aaKnown RBP13.01□□□□□ -0.33
USE1-206ENST00000595101 PNPP00491 289 aa13.01□□□□□ -0.33
USE1-206ENST00000595101 CD55P08174 381 aa13.01□□□□□ -0.33
USE1-206ENST00000595101 CA6P23280 308 aa13.01□□□□□ -0.33
USE1-206ENST00000595101 SNRPGP62308 76 aaKnown RBP13.01□□□□□ -0.33
USE1-206ENST00000595101 FAM3AP98173 230 aa13.01□□□□□ -0.33
USE1-206ENST00000595101 HOXA4Q00056 320 aaPredicted RBP13.01□□□□□ -0.33
USE1-206ENST00000595101 ZNF322Q6U7Q0 402 aaPredicted RBP13.01□□□□□ -0.33
USE1-206ENST00000595101 OR56B2PQ8NGI1 322 aa13.01□□□□□ -0.33
USE1-206ENST00000595101 SPSB4Q96A44 273 aa13.01□□□□□ -0.33
USE1-206ENST00000595101 REEP6Q96HR9 211 aa13.01□□□□□ -0.33
USE1-206ENST00000595101 LYZL4Q96KX0 146 aa13.01□□□□□ -0.33
USE1-206ENST00000595101 OR8B4Q96RC9 309 aa13.01□□□□□ -0.33
USE1-206ENST00000595101 CLN6Q9NWW5 311 aa13.01□□□□□ -0.33
USE1-206ENST00000595101 WARS2Q9UGM6 360 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms