RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 GRB2P62993 217 aaKnown RBP12.74□□□□□ -0.37
TRIM28-205ENST00000595028 GLYATL3Q5SZD4 288 aa12.74□□□□□ -0.37
TRIM28-205ENST00000595028 SPATC1Q76KD6 591 aa12.74□□□□□ -0.37
TRIM28-205ENST00000595028 OR2AE1Q8NHA4 323 aa12.74□□□□□ -0.37
TRIM28-205ENST00000595028 OR5K1Q8NHB7 308 aa12.74□□□□□ -0.37
TRIM28-205ENST00000595028 RNF133Q8WVZ7 376 aa12.74□□□□□ -0.37
TRIM28-205ENST00000595028 ZMYND19Q96E35 227 aaPredicted RBP12.74□□□□□ -0.37
TRIM28-205ENST00000595028 DUS3LQ96G46 650 aaKnown RBP12.74□□□□□ -0.37
TRIM28-205ENST00000595028 PLEKHA8Q96JA3 519 aa12.74□□□□□ -0.37
TRIM28-205ENST00000595028 ABHD6Q9BV23 337 aa12.74□□□□□ -0.37
TRIM28-205ENST00000595028 C19orf24Q9BVV8 132 aa12.74□□□□□ -0.37
TRIM28-205ENST00000595028 TEX12Q9BXU0 123 aa12.74□□□□□ -0.37
TRIM28-205ENST00000595028 GCM1Q9NP62 436 aa12.74□□□□□ -0.37
TRIM28-205ENST00000595028 HIF1ANQ9NWT6 349 aa12.74□□□□□ -0.37
TRIM28-205ENST00000595028 C5orf63A6NC05 138 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 F5H5P2 479 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 SELENOFO60613 162 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 SLC2A1P11166 492 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 FASP25445 335 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 RBMXP38159 391 aaKnown RBP12.73□□□□□ -0.37
TRIM28-205ENST00000595028 SLC15A1P46059 708 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 CX3CR1P49238 355 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 SRP9P49458 86 aaKnown RBP12.73□□□□□ -0.37
TRIM28-205ENST00000595028 DAPP51397 102 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 CRISP1P54107 249 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 BTG1P62324 171 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 ZNF92Q03936 586 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 KLHL12Q53G59 568 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 TMEM236Q5W0B7 351 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 ZNF771Q7L3S4 317 aaPredicted RBP12.73□□□□□ -0.37
TRIM28-205ENST00000595028 SHFQ7M4L6 423 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 CPOQ8IVL8 374 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 BBS1Q8NFJ9 593 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 SPRYD4Q8WW59 207 aaPredicted RBP12.73□□□□□ -0.37
TRIM28-205ENST00000595028 AMELYQ99218 206 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 GABARAPL1Q9H0R8 117 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 TOR3AQ9H497 397 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 TMEM100Q9NV29 134 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 UBAP1Q9NZ09 502 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 AP4S1Q9Y587 144 aa12.73□□□□□ -0.37
TRIM28-205ENST00000595028 CD300LBA8K4G0 201 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 IFNL4K9M1U5 179 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 CIB2O75838 187 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 HLA-DPB1P04440 258 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 FCGR1AP12314 374 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 ANPEPP15144 967 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 SLC2A5P22732 501 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 HSD11B1P28845 292 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 OPRL1P41146 370 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 ZMYND11Q15326 602 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 TMEM155Q4W5P6 130 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 SLC35D3Q5M8T2 416 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 SPICQ8N5J4 248 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 OTOSQ8NHW6 89 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 OPA3Q9H6K4 179 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 ARHGAP32A7KAX9 2087 aa12.72□□□□□ -0.37
TRIM28-205ENST00000595028 TGP01266 2768 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 GGT3PA6NGU5 568 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 G3V2T6 193 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 TMEM178BH3BS89 294 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 XRCC2O43543 280 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 PLPP2O43688 288 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 MITFO75030 526 aaPredicted RBP12.71□□□□□ -0.37
TRIM28-205ENST00000595028 ANXA2P07355 339 aaKnown RBP12.71□□□□□ -0.37
TRIM28-205ENST00000595028 THBS2P35442 1172 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 SRP14P37108 136 aaKnown RBP12.71□□□□□ -0.37
TRIM28-205ENST00000595028 MDH2P40926 338 aaKnown RBP12.71□□□□□ -0.37
TRIM28-205ENST00000595028 NAA10P41227 235 aaPredicted RBP12.71□□□□□ -0.37
TRIM28-205ENST00000595028 GATA4P43694 442 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 RPS7P62081 194 aaKnown RBP12.71□□□□□ -0.37
TRIM28-205ENST00000595028 ESRRGP62508 458 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 SNAPC1Q16533 368 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 RHOUQ7L0Q8 258 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 ASRGL1Q7L266 308 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 MOGAT3Q86VF5 341 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 CELF2-AS1Q8N7Q2 184 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 ZNF454Q8N9F8 522 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 OR56B2PQ8NGI1 322 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 ZNF420Q8TAQ5 688 aaPredicted RBP12.71□□□□□ -0.37
TRIM28-205ENST00000595028 SPSB4Q96A44 273 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 ADAT1Q9BUB4 502 aaKnown RBP12.71□□□□□ -0.37
TRIM28-205ENST00000595028 PRRG3Q9BZD7 231 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 SLC22A4Q9H015 551 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 G6PC2Q9NQR9 355 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 KRT84Q9NSB2 600 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 TVP23BQ9NYZ1 205 aa12.71□□□□□ -0.37
TRIM28-205ENST00000595028 MRPL15Q9P015 296 aaKnown RBP12.71□□□□□ -0.37
TRIM28-205ENST00000595028 NOP16Q9Y3C1 178 aaKnown RBP12.71□□□□□ -0.37
TRIM28-205ENST00000595028 A0A0G2JMP0 313 aa12.7□□□□□ -0.38
TRIM28-205ENST00000595028 IGHV3-64DA0A0J9YX35 117 aa12.7□□□□□ -0.38
TRIM28-205ENST00000595028 A0A0X1KG70 313 aa12.7□□□□□ -0.38
TRIM28-205ENST00000595028 TBX1O43435 398 aa12.7□□□□□ -0.38
TRIM28-205ENST00000595028 PNPP00491 289 aa12.7□□□□□ -0.38
TRIM28-205ENST00000595028 APOC1P02654 83 aa12.7□□□□□ -0.38
TRIM28-205ENST00000595028 LYNP07948 512 aa12.7□□□□□ -0.38
TRIM28-205ENST00000595028 SBK2P0C263 348 aa12.7□□□□□ -0.38
TRIM28-205ENST00000595028 CA6P23280 308 aa12.7□□□□□ -0.38
TRIM28-205ENST00000595028 CD200P41217 278 aa12.7□□□□□ -0.38
TRIM28-205ENST00000595028 RAD23AP54725 363 aa12.7□□□□□ -0.38
TRIM28-205ENST00000595028 ZNF121P58317 390 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms