RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 SPARCP09486 303 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 SRMP19623 302 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 POU3F1Q03052 451 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 TLE3Q04726 772 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 PEA15Q15121 130 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 PLPPR5Q32ZL2 321 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 CDNFQ49AH0 187 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 UNQ9370/PRO34162Q6UXP9 181 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 H1FNTQ75WM6 255 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 OR5AK2Q8NH90 309 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 MFSD8Q8NHS3 518 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 SLC39A7Q92504 469 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 CNTNAP3BQ96NU0 1288 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 DERL3Q96Q80 235 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 SDHAF3Q9NRP4 125 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 MED29Q9NX70 200 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 TAS2R8Q9NYW2 309 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 VSX1Q9NZR4 365 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 METTL1Q9UBP6 276 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 TNFSF18Q9UNG2 199 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 HS3ST3B1Q9Y662 390 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 LOC102723996A0A087X1L8 192 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 COLCA2A8K830 154 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 C1orf196B1AJZ1 125 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 NPIPA5E9PKD4 350 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 PIN1P1O15428 100 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 COX6A1P12074 109 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 NPBWR1P48145 328 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 SOX2P48431 317 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 SRSF4Q08170 494 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 ALKBH1Q13686 389 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 EIF2S3LQ2VIR3 472 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 GLT8D1Q68CQ7 371 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 RALGAPA1Q6GYQ0 2036 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 WDFY1Q8IWB7 410 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 ZNF433Q8N7K0 673 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 OTOSQ8NHW6 89 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 MED12Q93074 2177 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 HAVCR1Q96D42 359 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 CMKLR1Q99788 373 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 TLNRD1Q9H1K6 362 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 WDR13Q9H1Z4 485 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 TMEM138Q9NPI0 162 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 MRPL22Q9NWU5 206 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 DCAF16Q9NXF7 216 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 NPIPA1Q9UND3 350 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 PLEKHA6Q9Y2H5 1048 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 TMEM14AQ9Y6G1 99 aa15.2■□□□□ 0.02
SHKBP1-205ENST00000594973 IGLV1-36A0A0B4J1U3 117 aa15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 MPZL1O95297 269 aa15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 RLN1P04808 185 aa15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 SP9P0CG40 484 aa15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 CALCBP10092 127 aa15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 CLDN6P56747 220 aa15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 ADAM8P78325 824 aa15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 FMODQ06828 376 aa15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 FCRLAQ7L513 359 aa15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 POC1BQ8TC44 478 aa15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 ARL11Q969Q4 196 aa15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 ASF1BQ9NVP2 202 aa15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 COA3Q9Y2R0 106 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 CHCHD2Q9Y6H1 151 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 TTC28Q96AY4 2481 aa15.19■□□□□ 0.02
SHKBP1-205ENST00000594973 ZNF208O43345 1280 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 CYC1P08574 325 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 MSX1P28360 303 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 MYBPHQ13203 477 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 TEX30Q5JUR7 227 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 OR2Y1Q8NGV0 311 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 RPS4Y2Q8TD47 263 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 MRGPRX4Q96LA9 322 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 IMMP1LQ96LU5 166 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 ZNF471Q9BX82 626 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 C1orf198Q9H425 327 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 ZNF160Q9HCG1 818 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 LIPT2A6NK58 231 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 PHYHO14832 338 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 DKK1O94907 266 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 IGHMP01871 453 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 ACP1P24666 158 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 EGR3Q06889 387 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 RAB12Q6IQ22 244 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 GLB1L2Q8IW92 636 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 C15orf54Q8N8G6 183 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 WDSUB1Q8N9V3 476 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 OR4K17Q8NGC6 315 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 SYNPRQ8TBG9 265 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 EMC6Q9BV81 110 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 ZNF700Q9H0M5 742 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 ELOVL3Q9HB03 270 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 CHST11Q9NPF2 352 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 GTF2A1LQ9UNN4 478 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 DMRT1Q9Y5R6 373 aa15.18■□□□□ 0.02
SHKBP1-205ENST00000594973 CELSR3Q9NYQ7 3312 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 LNP1A1A4G5 178 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 CSF1P09603 554 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 RPS18P62269 152 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 HSF1Q00613 529 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 NAA40Q86UY6 237 aa15.17■□□□□ 0.02
SHKBP1-205ENST00000594973 BEST3Q8N1M1 668 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms