RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 TPTEP56180 551 aa13.23□□□□□ -0.29
VRK3-207ENST00000594092 RAB1AP62820 205 aa13.23□□□□□ -0.29
VRK3-207ENST00000594092 GABRA6Q16445 453 aa13.23□□□□□ -0.29
VRK3-207ENST00000594092 TMEM53Q6P2H8 277 aa13.23□□□□□ -0.29
VRK3-207ENST00000594092 DRAM2Q6UX65 266 aa13.23□□□□□ -0.29
VRK3-207ENST00000594092 STAC2Q6ZMT1 411 aa13.23□□□□□ -0.29
VRK3-207ENST00000594092 LUZP2Q86TE4 346 aa13.23□□□□□ -0.29
VRK3-207ENST00000594092 OR13C3Q8NGS6 347 aa13.23□□□□□ -0.29
VRK3-207ENST00000594092 OR51E1Q8TCB6 317 aa13.23□□□□□ -0.29
VRK3-207ENST00000594092 PGAM5Q96HS1 289 aa13.23□□□□□ -0.29
VRK3-207ENST00000594092 B3GNT2Q9NY97 397 aa13.23□□□□□ -0.29
VRK3-207ENST00000594092 SH3BGRL2Q9UJC5 107 aa13.23□□□□□ -0.29
VRK3-207ENST00000594092 A0A1B0GTI1 187 aa13.22□□□□□ -0.29
VRK3-207ENST00000594092 CIB4A0PJX0 185 aa13.22□□□□□ -0.29
VRK3-207ENST00000594092 ANKRD61A6NGH8 418 aa13.22□□□□□ -0.29
VRK3-207ENST00000594092 TMEM127O75204 238 aa13.22□□□□□ -0.29
VRK3-207ENST00000594092 SLC2A2P11168 524 aaPredicted RBP13.22□□□□□ -0.29
VRK3-207ENST00000594092 APEX1P27695 318 aaKnown RBP13.22□□□□□ -0.29
VRK3-207ENST00000594092 TSC22D1Q15714 1073 aa13.22□□□□□ -0.29
VRK3-207ENST00000594092 NANOS1Q8WY41 292 aaKnown RBP13.22□□□□□ -0.29
VRK3-207ENST00000594092 ABRACLQ9P1F3 81 aa13.22□□□□□ -0.29
VRK3-207ENST00000594092 CKLFQ9UBR5 152 aa13.22□□□□□ -0.29
VRK3-207ENST00000594092 V9GY05 133 aa13.22□□□□□ -0.29
VRK3-207ENST00000594092 FABP12A6NFH5 140 aa13.21□□□□□ -0.29
VRK3-207ENST00000594092 COX5BP10606 129 aa13.21□□□□□ -0.29
VRK3-207ENST00000594092 ATF1P18846 271 aa13.21□□□□□ -0.29
VRK3-207ENST00000594092 PSMD7P51665 324 aa13.21□□□□□ -0.29
VRK3-207ENST00000594092 GSG1Q2KHT4 349 aa13.21□□□□□ -0.29
VRK3-207ENST00000594092 FAM131AQ6UXB0 335 aa13.21□□□□□ -0.29
VRK3-207ENST00000594092 BEND4Q6ZU67 534 aa13.21□□□□□ -0.29
VRK3-207ENST00000594092 CXorf67Q86X51 503 aaPredicted RBP13.21□□□□□ -0.29
VRK3-207ENST00000594092 C1orf162Q8NEQ5 155 aaPredicted RBP13.21□□□□□ -0.29
VRK3-207ENST00000594092 BOD1Q96IK1 185 aa13.21□□□□□ -0.29
VRK3-207ENST00000594092 V9GYH0 126 aa13.21□□□□□ -0.29
VRK3-207ENST00000594092 SHANK1Q9Y566 2161 aa13.21□□□□□ -0.3
VRK3-207ENST00000594092 LOC100509620A0A075B734 347 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 A0A0G2JNJ9 132 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 A0A1B0GVI7 797 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 ANXA2P2A6NMY6 339 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 FAM25AB3EWG3 89 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 FAM25CB3EWG5 89 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 FAM25GB3EWG6 89 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 AIPO00170 330 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 SYT7O43581 403 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 LMX1BO60663 402 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 UPK1BO75841 260 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 MAS1P04201 325 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 P2RY6Q15077 328 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 ZNF181Q2M3W8 571 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 ZNF474Q6S9Z5 364 aaPredicted RBP13.2□□□□□ -0.3
VRK3-207ENST00000594092 NCCRP1Q6ZVX7 275 aaPredicted RBP13.2□□□□□ -0.3
VRK3-207ENST00000594092 LRRTM1Q86UE6 522 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 MDP1Q86V88 176 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 CCDC36Q8IYA8 594 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 ST6GALNAC3Q8NDV1 305 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 TRMT10AQ8TBZ6 339 aaKnown RBP13.2□□□□□ -0.3
VRK3-207ENST00000594092 GFI1Q99684 422 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 SOX7Q9BT81 388 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 CCDC32Q9BV29 185 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 GPR84Q9NQS5 396 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 Q9UFV3 132 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 FOXJ3Q9UPW0 622 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 TRAV8-7A0A075B6U6 113 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 A0A0U1RQV5 110 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 IFITM5A6NNB3 132 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 TBX1O43435 398 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 IGLV3-1P01715 115 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 HOXB1P14653 301 aaPredicted RBP13.2□□□□□ -0.3
VRK3-207ENST00000594092 FSTP19883 344 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 CCL1P22362 96 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 OPRM1P35372 400 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 UBE2NP61088 152 aaKnown RBP13.2□□□□□ -0.3
VRK3-207ENST00000594092 GFOD2Q3B7J2 385 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 SNAI3Q3KNW1 292 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 CNIH2Q6PI25 160 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 METAP1DQ6UB28 335 aaPredicted RBP13.2□□□□□ -0.3
VRK3-207ENST00000594092 LRRC28Q86X40 367 aaPredicted RBP13.2□□□□□ -0.3
VRK3-207ENST00000594092 SNX29P2Q8IUI4 249 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 ZNF584Q8IVC4 421 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 ZNF671Q8TAW3 534 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 LYZL4Q96KX0 146 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 ZNF75AQ96N20 296 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 ABCB10Q9NRK6 738 aa13.2□□□□□ -0.3
VRK3-207ENST00000594092 ZNF275Q9NSD4 429 aaPredicted RBP13.2□□□□□ -0.3
VRK3-207ENST00000594092 A0A1W2PR80 420 aa13.19□□□□□ -0.3
VRK3-207ENST00000594092 ZNF12P17014 697 aa13.19□□□□□ -0.3
VRK3-207ENST00000594092 ADRA2CP18825 462 aa13.19□□□□□ -0.3
VRK3-207ENST00000594092 STOMP27105 288 aa13.19□□□□□ -0.3
VRK3-207ENST00000594092 PLP2Q04941 152 aa13.19□□□□□ -0.3
VRK3-207ENST00000594092 RGS21Q2M5E4 152 aa13.19□□□□□ -0.3
VRK3-207ENST00000594092 HES5Q5TA89 166 aa13.19□□□□□ -0.3
VRK3-207ENST00000594092 ASPHD2Q6ICH7 369 aa13.19□□□□□ -0.3
VRK3-207ENST00000594092 XKRXQ6PP77 449 aa13.19□□□□□ -0.3
VRK3-207ENST00000594092 COMMD2Q86X83 199 aa13.19□□□□□ -0.3
VRK3-207ENST00000594092 SAMD12Q8N8I0 201 aa13.19□□□□□ -0.3
VRK3-207ENST00000594092 OR52H1Q8NGJ2 320 aa13.19□□□□□ -0.3
VRK3-207ENST00000594092 MRI1Q9BV20 369 aa13.19□□□□□ -0.3
VRK3-207ENST00000594092 OR10A2Q9H208 303 aa13.19□□□□□ -0.3
VRK3-207ENST00000594092 MSTNO14793 375 aa13.18□□□□□ -0.3
VRK3-207ENST00000594092 PAHP00439 452 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms