RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 RBMS3Q6XE24 437 aaKnown RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 Q6ZRG5 221 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 SLC36A1Q7Z2H8 476 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 ZNF709Q8N972 641 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 OR1S2Q8NGQ3 325 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 OR13C9Q8NGT0 318 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 C16orf52Q8NHV5 167 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 PP6455Q8WZ26 134 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 C10orf35Q96D05 121 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 RBMXL1Q96E39 390 aaKnown RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 SEH1LQ96EE3 360 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 MRPS24Q96EL2 167 aaKnown RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 BORCS8Q96FH0 119 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 KIRREL1Q96J84 757 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 TGM7Q96PF1 710 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 TECTBQ96PL2 329 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 LPAR4Q99677 370 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 ABHD6Q9BV23 337 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 NMNAT2Q9BZQ4 307 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 FLRT3Q9NZU0 649 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 KLHL13Q9P2N7 655 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 ASH2LQ9UBL3 628 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 GPR160Q9UJ42 338 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 GDF2Q9UK05 429 aaPredicted RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 RPH3AQ9Y2J0 694 aaPredicted RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 CARHSP1Q9Y2V2 147 aaKnown RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 PCDHGA1Q9Y5H4 931 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 FRMPD3Q5JV73 1810 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 ELOA3CA0A087WX78 387 aaPredicted RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 CCSO14618 274 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 TXNL1O43396 289 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 EIF1BO60739 113 aaKnown RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 VAMP5O95183 116 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 CD74P04233 296 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 ISG15P05161 165 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 FABP1P07148 127 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 CTXN2P0C2S0 81 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 THEGLP0DJG4 465 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 ZNF44P15621 663 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 ABOP16442 354 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 HLA-GP17693 338 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 MPZP25189 248 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 PAX6P26367 422 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 BLVRBP30043 206 aaPredicted RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 FCGR2CP31995 323 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 CD80P33681 288 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 CCR2P41597 374 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 RPS10P46783 165 aaKnown RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 CSNK1EP49674 416 aaKnown RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 CCR5P51681 352 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 EFNA3P52797 238 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 HTRA4P83105 476 aaPredicted RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 POU3F1Q03052 451 aaPredicted RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 ROM1Q03395 351 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 DLX2Q07687 328 aaPredicted RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 PPP1R1AQ13522 171 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 IL13RA2Q14627 380 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 OR7A5Q15622 319 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 USF2Q15853 346 aaPredicted RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 C4orf48Q5BLP8 95 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 FAM74A1Q5RGS3 127 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 LHFPL2Q6ZUX7 228 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 ATG4DQ86TL0 474 aaPredicted RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 CATSPERDQ86XM0 798 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 C1orf87Q8N0U7 546 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 GJC3Q8NFK1 279 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 OR52H1Q8NGJ2 320 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 SPPL3Q8TCT6 385 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 SFT2D1Q8WV19 159 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 OR1E3Q8WZA6 343 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 ELSPBP1Q96BH3 223 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 CMSS1Q9BQ75 279 aaKnown RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 ULBP3Q9BZM4 244 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 TINAGL1Q9GZM7 467 aaPredicted RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 ADAM19Q9H013 955 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 BCO1Q9HAY6 547 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 CUTCQ9NTM9 273 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 LRIT1Q9P2V4 623 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 CGGBP1Q9UFW8 167 aaPredicted RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 PISDQ9UG56 409 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 ZNF391Q9UJN7 358 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 LRP12Q9Y561 859 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 KCNMB2Q9Y691 235 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 NINQ8N4C6 2090 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 NUMA1Q14980 2115 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 CASP8AP2Q9UKL3 1982 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 SHISA3A0PJX4 238 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 SMCO3A2RU48 225 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 FITM1A5D6W6 292 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 B4DEV8 164 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 H7C1C5 153 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 MSTNO14793 375 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 PPM1DO15297 605 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 OR2C1O95371 312 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 CBX7O95931 251 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 VSIG10L2P0DP72 767 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 LIPCP11150 499 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 NFYBP25208 207 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 ITGB8P26012 769 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 LAP3P28838 519 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms