RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 IFNL4K9M1U5 179 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 FKBP6O75344 327 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 E2F6O75461 281 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 FOXH1O75593 365 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 ZNF205O95201 554 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 SLC2A1P11166 492 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 ADRA2CP18825 462 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 POU1F1P28069 291 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 MDH2P40926 338 aaKnown RBP11.66□□□□□ -0.54
APOC1-208ENST00000592535 PMELP40967 661 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 ZNF92Q03936 586 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 MAB21L1Q13394 359 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 TAF13Q15543 124 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 GLYATL3Q5SZD4 288 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 SPRYD4Q8WW59 207 aaPredicted RBP11.66□□□□□ -0.54
APOC1-208ENST00000592535 OTULINQ96BN8 352 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 REPIN1Q9BWE0 567 aaKnown RBP11.66□□□□□ -0.54
APOC1-208ENST00000592535 C7orf69Q9H7B7 122 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 TCRBV3S1A0A5B6 114 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 CD300LBA8K4G0 201 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 CEACAM18A8MTB9 384 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 ZNF878C9JN71 531 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 F5H0A9 414 aaPredicted RBP11.65□□□□□ -0.54
APOC1-208ENST00000592535 DNAJC8O75937 253 aaPredicted RBP11.65□□□□□ -0.54
APOC1-208ENST00000592535 HOXB6P17509 224 aaKnown RBP11.65□□□□□ -0.54
APOC1-208ENST00000592535 EPHA1P21709 976 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 PRKACGP22612 351 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 GATA3P23771 443 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 BLVRAP53004 296 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 EIF2B1Q14232 305 aaKnown RBP11.65□□□□□ -0.54
APOC1-208ENST00000592535 GINS1Q14691 196 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 ZSCAN26Q16670 478 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 FAM201AQ5SY85 155 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 PRAMEF6Q5VXH4 476 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 DPY19L4Q7Z388 723 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 C1QL2Q7Z5L3 287 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 ERI1Q8IV48 349 aaKnown RBP11.65□□□□□ -0.54
APOC1-208ENST00000592535 MUC20Q8N307 709 aaPredicted RBP11.65□□□□□ -0.54
APOC1-208ENST00000592535 OR6N2Q8NGY6 317 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 INTS14Q96SY0 518 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 OR51V1Q9H2C8 321 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 MMP26Q9NRE1 261 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 OPN4Q9UHM6 478 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 N6AMT1Q9Y5N5 214 aa11.65□□□□□ -0.54
APOC1-208ENST00000592535 GGT3PA6NGU5 568 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 TRAPPC2LH3BP13 241 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 RGS9O75916 674 aaPredicted RBP11.64□□□□□ -0.55
APOC1-208ENST00000592535 GLCEO94923 617 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 VENTXO95231 258 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 OSMP13725 252 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 CA6P23280 308 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 GSTT1P30711 240 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 CD200P41217 278 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 GATA4P43694 442 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 RAD23AP54725 363 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 OR8G1Q15617 311 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 ZNF181Q2M3W8 571 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 PLBD1Q6P4A8 553 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 TEX29Q8N6K0 151 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 PAPD5Q8NDF8 572 aaKnown RBP11.64□□□□□ -0.55
APOC1-208ENST00000592535 DVL3Q92997 716 aaPredicted RBP11.64□□□□□ -0.55
APOC1-208ENST00000592535 ZMYND19Q96E35 227 aaPredicted RBP11.64□□□□□ -0.55
APOC1-208ENST00000592535 AMELYQ99218 206 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 ADAT1Q9BUB4 502 aaKnown RBP11.64□□□□□ -0.55
APOC1-208ENST00000592535 ABHD6Q9BV23 337 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 CADM1Q9BY67 442 aaKnown RBP11.64□□□□□ -0.55
APOC1-208ENST00000592535 YY1AP1Q9H869 796 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 MARCH7Q9H992 704 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 ZNF556Q9HAH1 456 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 TMEM165Q9HC07 324 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 DNAJB9Q9UBS3 223 aa11.64□□□□□ -0.55
APOC1-208ENST00000592535 PPIAL4EA0A075B759 164 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 PPIAL4CA0A0B4J2A2 164 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 LRRC30A6NM36 301 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 A8MXK9 166 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 PRR23D1E9PI22 279 aaPredicted RBP11.63□□□□□ -0.55
APOC1-208ENST00000592535 PPIAL4DF5H284 164 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 GSC2O15499 205 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 TBX1O43435 398 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 FAM20BO75063 409 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 WNT2P09544 360 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 PRR23D2P0DMB1 279 aaPredicted RBP11.63□□□□□ -0.55
APOC1-208ENST00000592535 PPIAL4FP0DN26 164 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 ANXA8P13928 327 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 RPS2P15880 293 aaKnown RBP11.63□□□□□ -0.55
APOC1-208ENST00000592535 PAICSP22234 425 aaKnown RBP11.63□□□□□ -0.55
APOC1-208ENST00000592535 CX3CR1P49238 355 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 GRB2P62993 217 aaKnown RBP11.63□□□□□ -0.55
APOC1-208ENST00000592535 CDK5Q00535 292 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 SCGB2A2Q13296 93 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 MPPED2Q15777 294 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 ESCO2Q56NI9 601 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 TIGD4Q8IY51 512 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 C1orf87Q8N0U7 546 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 CELF2-AS1Q8N7Q2 184 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 DEFB108BQ8NET1 73 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 SEMA6DQ8NFY4 1073 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 OR56B2PQ8NGI1 322 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 NANPQ8TBE9 248 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 RNF133Q8WVZ7 376 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms