RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SPATC1Q76KD6 591 aa22.97■■□□□ 1.27
SMAD4-213ENST00000591914 RHOUQ7L0Q8 258 aa22.97■■□□□ 1.27
SMAD4-213ENST00000591914 OR2AE1Q8NHA4 323 aa22.97■■□□□ 1.27
SMAD4-213ENST00000591914 PLEKHA8Q96JA3 519 aa22.97■■□□□ 1.27
SMAD4-213ENST00000591914 SIGLEC11Q96RL6 698 aa22.97■■□□□ 1.27
SMAD4-213ENST00000591914 GAL3ST1Q99999 423 aa22.97■■□□□ 1.27
SMAD4-213ENST00000591914 TOR3AQ9H497 397 aa22.97■■□□□ 1.27
SMAD4-213ENST00000591914 ISPDA4D126 451 aa22.96■■□□□ 1.27
SMAD4-213ENST00000591914 F5H5P2 479 aa22.96■■□□□ 1.27
SMAD4-213ENST00000591914 G3V2T6 193 aa22.96■■□□□ 1.27
SMAD4-213ENST00000591914 SLC2A5P22732 501 aa22.96■■□□□ 1.27
SMAD4-213ENST00000591914 SRP9P49458 86 aaKnown RBP22.96■■□□□ 1.27
SMAD4-213ENST00000591914 MMP16P51512 607 aa22.96■■□□□ 1.27
SMAD4-213ENST00000591914 SLC35D3Q5M8T2 416 aa22.96■■□□□ 1.27
SMAD4-213ENST00000591914 GLYATL3Q5SZD4 288 aa22.96■■□□□ 1.27
SMAD4-213ENST00000591914 BBS1Q8NFJ9 593 aa22.96■■□□□ 1.27
SMAD4-213ENST00000591914 AMELYQ99218 206 aa22.96■■□□□ 1.27
SMAD4-213ENST00000591914 TRAV20A0A0B4J274 112 aa22.95■■□□□ 1.26
SMAD4-213ENST00000591914 IFNL4K9M1U5 179 aa22.95■■□□□ 1.26
SMAD4-213ENST00000591914 HLA-DPB1P04440 258 aa22.95■■□□□ 1.26
SMAD4-213ENST00000591914 SLC2A1P11166 492 aa22.95■■□□□ 1.26
SMAD4-213ENST00000591914 FCGR1AP12314 374 aa22.95■■□□□ 1.26
SMAD4-213ENST00000591914 THBS2P35442 1172 aa22.95■■□□□ 1.26
SMAD4-213ENST00000591914 ESRRGP62508 458 aa22.95■■□□□ 1.26
SMAD4-213ENST00000591914 PTGES3Q15185 160 aaKnown RBP22.95■■□□□ 1.26
SMAD4-213ENST00000591914 KLHL12Q53G59 568 aa22.95■■□□□ 1.26
SMAD4-213ENST00000591914 OTOSQ8NHW6 89 aa22.95■■□□□ 1.26
SMAD4-213ENST00000591914 SPRYD4Q8WW59 207 aaPredicted RBP22.95■■□□□ 1.26
SMAD4-213ENST00000591914 MDFIQ99750 246 aa22.95■■□□□ 1.26
SMAD4-213ENST00000591914 GABARAPL1Q9H0R8 117 aa22.95■■□□□ 1.26
SMAD4-213ENST00000591914 CD300LBA8K4G0 201 aa22.94■■□□□ 1.26
SMAD4-213ENST00000591914 TMEM178BH3BS89 294 aa22.94■■□□□ 1.26
SMAD4-213ENST00000591914 SELENOFO60613 162 aa22.94■■□□□ 1.26
SMAD4-213ENST00000591914 CIB2O75838 187 aa22.94■■□□□ 1.26
SMAD4-213ENST00000591914 OPRL1P41146 370 aa22.94■■□□□ 1.26
SMAD4-213ENST00000591914 CX3CR1P49238 355 aa22.94■■□□□ 1.26
SMAD4-213ENST00000591914 SNAPC1Q16533 368 aa22.94■■□□□ 1.26
SMAD4-213ENST00000591914 CXXC5Q7LFL8 322 aaKnown RBP22.94■■□□□ 1.26
SMAD4-213ENST00000591914 AMIGO2Q86SJ2 522 aa22.94■■□□□ 1.26
SMAD4-213ENST00000591914 ZDHHC13Q8IUH4 622 aa22.94■■□□□ 1.26
SMAD4-213ENST00000591914 ZNF454Q8N9F8 522 aa22.94■■□□□ 1.26
SMAD4-213ENST00000591914 SPSB4Q96A44 273 aa22.94■■□□□ 1.26
SMAD4-213ENST00000591914 OPA3Q9H6K4 179 aa22.94■■□□□ 1.26
SMAD4-213ENST00000591914 KRT84Q9NSB2 600 aa22.94■■□□□ 1.26
SMAD4-213ENST00000591914 TVP23BQ9NYZ1 205 aa22.94■■□□□ 1.26
SMAD4-213ENST00000591914 XRCC2O43543 280 aa22.93■■□□□ 1.26
SMAD4-213ENST00000591914 PLPP2O43688 288 aa22.93■■□□□ 1.26
SMAD4-213ENST00000591914 SBK2P0C263 348 aa22.93■■□□□ 1.26
SMAD4-213ENST00000591914 HSD11B1P28845 292 aa22.93■■□□□ 1.26
SMAD4-213ENST00000591914 BTG1P62324 171 aa22.93■■□□□ 1.26
SMAD4-213ENST00000591914 ZMYND11Q15326 602 aa22.93■■□□□ 1.26
SMAD4-213ENST00000591914 TMEM155Q4W5P6 130 aa22.93■■□□□ 1.26
SMAD4-213ENST00000591914 KDM4DQ6B0I6 523 aa22.93■■□□□ 1.26
SMAD4-213ENST00000591914 PRSS45Q7RTY3 260 aa22.93■■□□□ 1.26
SMAD4-213ENST00000591914 LRRC28Q86X40 367 aaPredicted RBP22.93■■□□□ 1.26
SMAD4-213ENST00000591914 CELF2-AS1Q8N7Q2 184 aa22.93■■□□□ 1.26
SMAD4-213ENST00000591914 LRTOMTQ8WZ04 291 aa22.93■■□□□ 1.26
SMAD4-213ENST00000591914 SLC22A4Q9H015 551 aa22.93■■□□□ 1.26
SMAD4-213ENST00000591914 MITFO75030 526 aaPredicted RBP22.92■■□□□ 1.26
SMAD4-213ENST00000591914 APOC1P02654 83 aa22.92■■□□□ 1.26
SMAD4-213ENST00000591914 LYNP07948 512 aa22.92■■□□□ 1.26
SMAD4-213ENST00000591914 GATA4P43694 442 aa22.92■■□□□ 1.26
SMAD4-213ENST00000591914 MAB21L1Q13394 359 aa22.92■■□□□ 1.26
SMAD4-213ENST00000591914 ZNF181Q2M3W8 571 aa22.92■■□□□ 1.26
SMAD4-213ENST00000591914 ZNF420Q8TAQ5 688 aaPredicted RBP22.92■■□□□ 1.26
SMAD4-213ENST00000591914 G6PC2Q9NQR9 355 aa22.92■■□□□ 1.26
SMAD4-213ENST00000591914 UBAP1Q9NZ09 502 aa22.92■■□□□ 1.26
SMAD4-213ENST00000591914 N6AMT1Q9Y5N5 214 aa22.92■■□□□ 1.26
SMAD4-213ENST00000591914 GGT3PA6NGU5 568 aa22.91■■□□□ 1.26
SMAD4-213ENST00000591914 CA6P23280 308 aa22.91■■□□□ 1.26
SMAD4-213ENST00000591914 CD200P41217 278 aa22.91■■□□□ 1.26
SMAD4-213ENST00000591914 NAA10P41227 235 aaPredicted RBP22.91■■□□□ 1.26
SMAD4-213ENST00000591914 RPS7P62081 194 aaKnown RBP22.91■■□□□ 1.26
SMAD4-213ENST00000591914 APOFQ13790 326 aa22.91■■□□□ 1.26
SMAD4-213ENST00000591914 ZNF771Q7L3S4 317 aaPredicted RBP22.91■■□□□ 1.26
SMAD4-213ENST00000591914 MOGAT3Q86VF5 341 aa22.91■■□□□ 1.26
SMAD4-213ENST00000591914 SPICQ8N5J4 248 aa22.91■■□□□ 1.26
SMAD4-213ENST00000591914 SP140LQ9H930 580 aa22.91■■□□□ 1.26
SMAD4-213ENST00000591914 MRPL15Q9P015 296 aaKnown RBP22.91■■□□□ 1.26
SMAD4-213ENST00000591914 NOP16Q9Y3C1 178 aaKnown RBP22.91■■□□□ 1.26
SMAD4-213ENST00000591914 COL6A5A8TX70 2615 aa22.91■■□□□ 1.26
SMAD4-213ENST00000591914 IGHV3-64DA0A0J9YX35 117 aa22.9■■□□□ 1.26
SMAD4-213ENST00000591914 PRKYO43930 277 aa22.9■■□□□ 1.26
SMAD4-213ENST00000591914 GMDSO60547 372 aa22.9■■□□□ 1.26
SMAD4-213ENST00000591914 ANXA2P07355 339 aaKnown RBP22.9■■□□□ 1.26
SMAD4-213ENST00000591914 H2BFMP0C1H6 154 aa22.9■■□□□ 1.26
SMAD4-213ENST00000591914 EPHA2P29317 976 aa22.9■■□□□ 1.26
SMAD4-213ENST00000591914 ZNF121P58317 390 aaPredicted RBP22.9■■□□□ 1.26
SMAD4-213ENST00000591914 OR8G1Q15617 311 aa22.9■■□□□ 1.26
SMAD4-213ENST00000591914 CCDC121Q6ZUS5 278 aa22.9■■□□□ 1.26
SMAD4-213ENST00000591914 OR52H1Q8NGJ2 320 aa22.9■■□□□ 1.26
SMAD4-213ENST00000591914 THEM6Q8WUY1 208 aa22.9■■□□□ 1.26
SMAD4-213ENST00000591914 TEAD3Q99594 435 aa22.9■■□□□ 1.26
SMAD4-213ENST00000591914 PRRG3Q9BZD7 231 aa22.9■■□□□ 1.26
SMAD4-213ENST00000591914 KLHDC2Q9Y2U9 406 aa22.9■■□□□ 1.26
SMAD4-213ENST00000591914 CCDC182A6NF36 153 aa22.89■■□□□ 1.25
SMAD4-213ENST00000591914 ZAR1LA6NP61 321 aa22.89■■□□□ 1.25
SMAD4-213ENST00000591914 TBX1O43435 398 aa22.89■■□□□ 1.25
SMAD4-213ENST00000591914 PNPP00491 289 aa22.89■■□□□ 1.25
SMAD4-213ENST00000591914 MDH2P40926 338 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms