RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 SNTB2Q13425 540 aaKnown RBP6.4□□□□□ -1.38
VMP1-213ENST00000591877 HIST3H3Q16695 136 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 CYBRD1Q53TN4 286 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 ERICH5Q6P6B1 374 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 DEF8Q6ZN54 512 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 PIWIL3Q7Z3Z3 882 aaKnown RBP6.4□□□□□ -1.38
VMP1-213ENST00000591877 NANOGNBQ7Z5D8 188 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 CDK20Q8IZL9 346 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 SVOPLQ8N434 492 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 SLC22A24Q8N4F4 322 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 MOSPD2Q8NHP6 518 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 LIPHQ8WWY8 451 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 RCN3Q96D15 328 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 SLC25A44Q96H78 314 aaPredicted RBP6.4□□□□□ -1.38
VMP1-213ENST00000591877 SEPHS2Q99611 448 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 MRPL13Q9BYD1 178 aaKnown RBP6.4□□□□□ -1.38
VMP1-213ENST00000591877 MRPL37Q9BZE1 423 aaKnown RBP6.4□□□□□ -1.38
VMP1-213ENST00000591877 DENND2DQ9H6A0 471 aaPredicted RBP6.4□□□□□ -1.38
VMP1-213ENST00000591877 B3GAT2Q9NPZ5 323 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 TMEM38BQ9NVV0 291 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 RIMS3Q9UJD0 308 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 CEPT1Q9Y6K0 416 aa6.4□□□□□ -1.38
VMP1-213ENST00000591877 IGKV1D-43A0A0B4J1Z2 117 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 LOC390937A0A1W2PQ73 354 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 SH3PXD2BA1X283 911 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 NDUFS8O00217 210 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 FFAR1O14842 300 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 TRMUO75648 421 aaKnown RBP6.39□□□□□ -1.39
VMP1-213ENST00000591877 OR7A10O76100 309 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 STAMBPO95630 424 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 BCL10O95999 233 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 IGF2P01344 180 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 HIST1H2ABP04908 130 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 CSF3P09919 207 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 NHLRC4P0CG21 123 aaPredicted RBP6.39□□□□□ -1.39
VMP1-213ENST00000591877 UMPSP11172 480 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 AQP2P41181 271 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 RBM34P42696 430 aaKnown RBP6.39□□□□□ -1.39
VMP1-213ENST00000591877 PDLIM4P50479 330 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 ZNF133P52736 654 aaPredicted RBP6.39□□□□□ -1.39
VMP1-213ENST00000591877 TAS2R41P59536 307 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 SELENOWP63302 87 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 MRPS34P82930 218 aaKnown RBP6.39□□□□□ -1.39
VMP1-213ENST00000591877 FHL1Q13642 323 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 GGTLC2Q14390 218 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 MAPRE2Q15555 327 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 CDONQ4KMG0 1287 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 LRRC23Q53EV4 343 aaPredicted RBP6.39□□□□□ -1.39
VMP1-213ENST00000591877 ESCO2Q56NI9 601 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 ARMC4Q5T2S8 1044 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 C8orf82Q6P1X6 216 aaPredicted RBP6.39□□□□□ -1.39
VMP1-213ENST00000591877 HIST3H2AQ7L7L0 130 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 LRP11Q86VZ4 500 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 MICU2Q8IYU8 434 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 ARIH2OSQ8N7S6 290 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 OR2T12Q8NG77 320 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 TMEM239Q8WW34 195 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 HIST1H2ACQ93077 130 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 MCHR2Q969V1 340 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 MRPL24Q96A35 216 aaKnown RBP6.39□□□□□ -1.39
VMP1-213ENST00000591877 SGTBQ96EQ0 304 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 RRNAD1Q96FB5 475 aaKnown RBP6.39□□□□□ -1.39
VMP1-213ENST00000591877 SH3GL3Q99963 347 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 BPESC1Q9GZL8 116 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 POLR2J2Q9GZM3 115 aaKnown RBP6.39□□□□□ -1.39
VMP1-213ENST00000591877 POLR2J3Q9H1A7 115 aaKnown RBP6.39□□□□□ -1.39
VMP1-213ENST00000591877 MAN2C1Q9NTJ4 1040 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 DECR2Q9NUI1 292 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 MRGBPQ9NV56 204 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 GID8Q9NWU2 228 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 MYEF2Q9P2K5 600 aaKnown RBP6.39□□□□□ -1.39
VMP1-213ENST00000591877 FKBP7Q9Y680 259 aa6.39□□□□□ -1.39
VMP1-213ENST00000591877 ELOVL7A1L3X0 281 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 LYNX1G3V0Z9 82 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 NME4O00746 187 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 HSPB6O14558 160 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 SLC22A2O15244 555 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 UBL3O95164 117 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 RAB36O95755 333 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 SERPINA5P05154 406 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 ADRA2AP08913 450 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 MMP7P09237 267 aaPredicted RBP6.38□□□□□ -1.39
VMP1-213ENST00000591877 OR8G3PP0DMU2 310 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 LYNX1P0DP58 116 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 THRBP10828 461 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 COX4I1P13073 169 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 CCL2P13500 99 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 DAOP14920 347 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 ACADSP16219 412 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 GIFP27352 417 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 IL2RGP31785 369 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 DCTDP32321 178 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 GLRXP35754 106 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 YAP1P46937 504 aaKnown RBP6.38□□□□□ -1.39
VMP1-213ENST00000591877 LIPEQ05469 1076 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 MAD2L1BPQ15013 274 aaPredicted RBP6.38□□□□□ -1.39
VMP1-213ENST00000591877 CARTPTQ16568 116 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 MIDNQ504T8 468 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 CYB5R2Q6BCY4 276 aa6.38□□□□□ -1.39
VMP1-213ENST00000591877 TSEN54Q7Z6J9 526 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms