RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ELMOD3Q96FG2 381 aa9.49□□□□□ -0.89
SMAD4-211ENST00000590499 DIRC2Q96SL1 478 aa9.49□□□□□ -0.89
SMAD4-211ENST00000590499 MED20Q9H944 212 aa9.49□□□□□ -0.89
SMAD4-211ENST00000590499 ZNF556Q9HAH1 456 aa9.49□□□□□ -0.89
SMAD4-211ENST00000590499 SLC25A19Q9HC21 320 aa9.49□□□□□ -0.89
SMAD4-211ENST00000590499 DECR2Q9NUI1 292 aa9.49□□□□□ -0.89
SMAD4-211ENST00000590499 PTTG3PQ9NZH4 202 aa9.49□□□□□ -0.89
SMAD4-211ENST00000590499 F5H5K5 113 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 M0R135 149 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 ZNF593O00488 134 aaPredicted RBP9.48□□□□□ -0.89
SMAD4-211ENST00000590499 PPIHO43447 177 aaKnown RBP9.48□□□□□ -0.89
SMAD4-211ENST00000590499 SPARCP09486 303 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 IGFBP5P24593 272 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 DAPP51397 102 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 CDH15P55291 814 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 LMO4P61968 165 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 FAM166AQ6J272 317 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 TIGD4Q8IY51 512 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 ATG16L2Q8NAA4 619 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 OR6K6Q8NGW6 343 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 OR5K1Q8NHB7 308 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 ZNF799Q96GE5 643 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 EGLN1Q9GZT9 426 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 GABARAPL1Q9H0R8 117 aa9.48□□□□□ -0.89
SMAD4-211ENST00000590499 PAPOLBQ9NRJ5 636 aaKnown RBP9.48□□□□□ -0.89
SMAD4-211ENST00000590499 C5orf63A6NC05 138 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 IQCF6A8MYZ5 107 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 TPD52L2O43399 206 aaKnown RBP9.47□□□□□ -0.89
SMAD4-211ENST00000590499 LMX1BO60663 402 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 GLCEO94923 617 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 HMGN1P05114 100 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 SLC2A5P22732 501 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 GSTT1P30711 240 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 CRISP1P54107 249 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 TPTEP56180 551 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 TNFAIP6P98066 277 aaPredicted RBP9.47□□□□□ -0.89
SMAD4-211ENST00000590499 HNRNPA0Q13151 305 aaKnown RBP9.47□□□□□ -0.89
SMAD4-211ENST00000590499 GK2Q14410 553 aaPredicted RBP9.47□□□□□ -0.89
SMAD4-211ENST00000590499 HFEQ30201 348 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 TMEM236Q5W0B7 351 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 OR2T2Q6IF00 324 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 PLBD1Q6P4A8 553 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 DRAM2Q6UX65 266 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 LINC01356Q8N9X3 169 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 OR8G5Q8NG78 346 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 SPTSSAQ969W0 71 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 SLAMF6Q96DU3 332 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 INTS14Q96SY0 518 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 SLC30A2Q9BRI3 323 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 DCAF16Q9NXF7 216 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 WIPI2Q9Y4P8 454 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 AP4S1Q9Y587 144 aa9.47□□□□□ -0.89
SMAD4-211ENST00000590499 ARHGAP32A7KAX9 2087 aa9.46□□□□□ -0.89
SMAD4-211ENST00000590499 FAM157AC9JC47 383 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 CLDN25C9JDP6 229 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 ZNF878C9JN71 531 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 PRR23D1E9PI22 279 aaPredicted RBP9.46□□□□□ -0.9
SMAD4-211ENST00000590499 MLNRO43193 412 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 PRODHO43272 600 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 MITFO75030 526 aaPredicted RBP9.46□□□□□ -0.9
SMAD4-211ENST00000590499 TGFAP01135 160 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 LCATP04180 440 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 PRR23D2P0DMB1 279 aaPredicted RBP9.46□□□□□ -0.9
SMAD4-211ENST00000590499 FCGR1AP12314 374 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 PAICSP22234 425 aaKnown RBP9.46□□□□□ -0.9
SMAD4-211ENST00000590499 FASP25445 335 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 ESRRGP62508 458 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 SNAI3Q3KNW1 292 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 CHRFAM7AQ494W8 412 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 AVPI1Q5T686 147 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 KDM4DQ6B0I6 523 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 PRSS45Q7RTY3 260 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 DPY19L4Q7Z388 723 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 ERI1Q8IV48 349 aaKnown RBP9.46□□□□□ -0.9
SMAD4-211ENST00000590499 CPOQ8IVL8 374 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 OR5AS1Q8N127 324 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 ZNF283Q8N7M2 679 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 BBS1Q8NFJ9 593 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 OR2Z1Q8NG97 314 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 OR6N2Q8NGY6 317 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 RNF133Q8WVZ7 376 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 ITLN1Q8WWA0 313 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 CCL17Q92583 94 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 ZMYND19Q96E35 227 aaPredicted RBP9.46□□□□□ -0.9
SMAD4-211ENST00000590499 AMELYQ99218 206 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 KCNJ15Q99712 375 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 COPS4Q9BT78 406 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 ABHD6Q9BV23 337 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 OR51V1Q9H2C8 321 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 NARFLQ9H6Q4 476 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 TREM2Q9NZC2 230 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 KIF17Q9P2E2 1029 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 IL19Q9UHD0 177 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 CDC42EP3Q9UKI2 254 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 KCNS2Q9ULS6 477 aa9.46□□□□□ -0.9
SMAD4-211ENST00000590499 G3V2T6 193 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 SELENOFO60613 162 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 CIB2O75838 187 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 SELEP16581 610 aa9.45□□□□□ -0.9
SMAD4-211ENST00000590499 TNFSF4P23510 183 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 199.9 ms