RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 E7EQL1 145 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 CTAG2O75638 210 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 TTRP02766 147 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 THBS4P35443 961 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 KIR3DL2P43630 455 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 BDH1Q02338 343 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 DOC2BQ14184 412 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 GFOD2Q3B7J2 385 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 ZNF718Q3SXZ3 478 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 ZNF672Q499Z4 452 aaPredicted RBP13.06□□□□□ -0.32
ATG4D-211ENST00000589753 ZNF367Q7RTV3 350 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 OR2AE1Q8NHA4 323 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 LILRB1Q8NHL6 650 aaPredicted RBP13.06□□□□□ -0.32
ATG4D-211ENST00000589753 TMEM171Q8WVE6 324 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 FCGR1BQ92637 280 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 AKAP1Q92667 903 aaKnown RBP eCLIP13.06□□□□□ -0.32
ATG4D-211ENST00000589753 SGK3Q96BR1 496 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 MARS2Q96GW9 593 aaKnown RBP13.06□□□□□ -0.32
ATG4D-211ENST00000589753 OR2J1Q9GZK6 312 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 RGCCQ9H4X1 137 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 ZNF442Q9H7R0 627 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 CISD1Q9NZ45 108 aaKnown RBP13.06□□□□□ -0.32
ATG4D-211ENST00000589753 ST6GALNAC2Q9UJ37 374 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 ANKHD1Q8IWZ3 2542 aaKnown RBP13.05□□□□□ -0.32
ATG4D-211ENST00000589753 HELZ2Q9BYK8 2649 aaKnown RBP13.05□□□□□ -0.32
ATG4D-211ENST00000589753 A0A0U1RQV5 110 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 VSTM5A8MXK1 200 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 OGG1O15527 345 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 RPSAP08865 295 aaKnown RBP13.05□□□□□ -0.32
ATG4D-211ENST00000589753 HSMCR30P0CW71 290 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 ATP6V1B1P15313 513 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 GCH1P30793 250 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 FABP6P51161 128 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 ZNF92Q03936 586 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 GK2Q14410 553 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-211ENST00000589753 HLXQ14774 488 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-211ENST00000589753 CDK5R1Q15078 307 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 ODF4Q2M2E3 257 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 UBE2UQ5VVX9 321 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 FBXW12Q6X9E4 464 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 KCTD8Q6ZWB6 473 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 MRPL21Q7Z2W9 205 aaKnown RBP13.05□□□□□ -0.32
ATG4D-211ENST00000589753 COMMD2Q86X83 199 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 ZNF295-AS1Q8N0V1 137 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 ZFP41Q8N8Y5 198 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 OR51E1Q8TCB6 317 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 KLF14Q8TD94 323 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-211ENST00000589753 SPSB4Q96A44 273 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 C14orf79Q96F83 325 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 REEP6Q96HR9 211 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 DHRS9Q9BPW9 319 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 OPA3Q9H6K4 179 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 VCX3AQ9NNX9 186 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 ISYNA1Q9NPH2 558 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 ZNF391Q9UJN7 358 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 CMAHPQ9Y471 501 aa13.05□□□□□ -0.32
ATG4D-211ENST00000589753 SIRT4Q9Y6E7 314 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-211ENST00000589753 A0A1W2PPR1 153 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 TMEM212A6NML5 194 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 OR4C45A6NMZ5 311 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 H3BSA7 217 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 P2RY10O00398 339 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 UBCP0CG48 685 aaKnown RBP13.04□□□□□ -0.32
ATG4D-211ENST00000589753 ZNF250P15622 560 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 CELP19835 753 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 CFL1P23528 166 aaKnown RBP13.04□□□□□ -0.32
ATG4D-211ENST00000589753 TLE4Q04727 773 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 MLLT11Q13015 90 aaPredicted RBP13.04□□□□□ -0.32
ATG4D-211ENST00000589753 NEDD8Q15843 81 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 ADIPOQQ15848 244 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 MBNL2Q5VZF2 373 aaKnown RBP13.04□□□□□ -0.32
ATG4D-211ENST00000589753 DMKNQ6E0U4 476 aaPredicted RBP13.04□□□□□ -0.32
ATG4D-211ENST00000589753 PGAP1Q75T13 922 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 TMEM200AQ86VY9 491 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 ZNF676Q8N7Q3 588 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 OR5AK2Q8NH90 309 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 SYNPRQ8TBG9 265 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 RPS4Y2Q8TD47 263 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 FBXW5Q969U6 566 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 CMBLQ96DG6 245 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 SMIM19Q96E16 107 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 LYZL4Q96KX0 146 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 MGLLQ99685 303 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 REPIN1Q9BWE0 567 aaKnown RBP13.04□□□□□ -0.32
ATG4D-211ENST00000589753 COMMD4Q9H0A8 199 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 CLEC4MQ9H2X3 399 aaPredicted RBP13.04□□□□□ -0.32
ATG4D-211ENST00000589753 GPR84Q9NQS5 396 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 FZR1Q9UM11 496 aa13.04□□□□□ -0.32
ATG4D-211ENST00000589753 HEATR1Q9H583 2144 aaKnown RBP13.04□□□□□ -0.32
ATG4D-211ENST00000589753 PNMA8CA0A1B0GUJ8 204 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 TRIM64CA6NLI5 447 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 HS3ST1O14792 307 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 ZFPL1O95159 310 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 IGLV3-1P01715 115 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 ISG15P05161 165 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 OR4A8P0C604 315 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 SMIM18P0DKX4 95 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 RAC2P15153 192 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 APOBEC3AP31941 199 aaPredicted RBP13.03□□□□□ -0.32
ATG4D-211ENST00000589753 MPV17P39210 176 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms